RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 COX5BP10606 129 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 SRMP19623 302 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 SLC6A9P48067 706 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 SFRP5Q5T4F7 317 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 NANOS1Q8WY41 292 aaKnown RBP21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 ORAI1Q96D31 301 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 PLEKHB1Q9UF11 243 aaPredicted RBP21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 DHDHQ9UQ10 334 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 N6AMT1Q9Y5N5 214 aa21.7■■□□□ 1.06
CAPNS1-215ENST00000628018 ITPR1Q14643 2758 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A1B0GTI1 187 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 SMIM30A4D0T7 59 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 E9PLN8 166 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 RAD51DO75771 328 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 CAV3P56539 151 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 HGFACQ04756 655 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 PMPCAQ10713 525 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 LINC00299Q6ZSB3 139 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 BEND4Q6ZU67 534 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 NR2C2APQ86WQ0 139 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 CCDC36Q8IYA8 594 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 C1orf162Q8NEQ5 155 aaPredicted RBP21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 PGAM5Q96HS1 289 aa21.69■■□□□ 1.06
CAPNS1-215ENST00000628018 INTS1Q8N201 2190 aaKnown RBP21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 CIB4A0PJX0 185 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 NCR1O76036 304 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 IGLV3-1P01715 115 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 P2RY6Q15077 328 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 ST6GALNAC3Q8NDV1 305 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 OR51E1Q8TCB6 317 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 KCNS3Q9BQ31 491 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 CXorf56Q9H5V9 222 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 MAP1BP46821 2468 aaKnown RBP21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 ZGRF1Q86YA3 2104 aa21.68■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A075B6Q4 140 aa21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 C5orf63A6NC05 138 aa21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 HOXB1P14653 301 aaPredicted RBP21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 CCL1P22362 96 aa21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 GSG1Q2KHT4 349 aa21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 LUZP2Q86TE4 346 aa21.67■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A0U1RQV5 110 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 SYT7O43581 403 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 RAB3BP20337 219 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 APEX1P27695 318 aaKnown RBP21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 CEP78Q5JTW2 689 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 CXorf67Q86X51 503 aaPredicted RBP21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 OR6Q1Q8NGQ2 317 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 OR13C3Q8NGS6 347 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 ZNF75AQ96N20 296 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 GPR84Q9NQS5 396 aa21.66■■□□□ 1.06
CAPNS1-215ENST00000628018 LOC100509620A0A075B734 347 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A0G2JK05 382 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A0G2JNJ9 132 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 IQCMA0A1B0GVH7 501 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 A0A1B0GVI7 797 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 CD2P06729 351 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 OPRM1P35372 400 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 SNAI3Q3KNW1 292 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ZNF474Q6S9Z5 364 aaPredicted RBP21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 STAC2Q6ZMT1 411 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ZNF584Q8IVC4 421 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 OR52H1Q8NGJ2 320 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 WBP1Q96G27 269 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ZCCHC4Q9H5U6 513 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 SP140LQ9H930 580 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 TCF7L1Q9HCS4 588 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ZNF275Q9NSD4 429 aaPredicted RBP21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 Q9UFV3 132 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 SH3BGRL2Q9UJC5 107 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 PKD1L2Q7Z442 2459 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ANKRD61A6NGH8 418 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 STOMP27105 288 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 BMXP51813 675 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 OR10A3P58181 314 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 UBE2NP61088 152 aaKnown RBP21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 PLP2Q04941 152 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 TSC22D1Q15714 1073 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 ASPHD2Q6ICH7 369 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 MDP1Q86V88 176 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 PLPP7Q8NBV4 271 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 C6orf62Q9GZU0 229 aaPredicted RBP21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 OR10A2Q9H208 303 aa21.65■■□□□ 1.06
CAPNS1-215ENST00000628018 TRAV8-7A0A075B6U6 113 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 TBX1O43435 398 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 LMX1BO60663 402 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 MOGQ16653 247 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 DOK3Q7L591 496 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 LRRTM1Q86UE6 522 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 CROCCP3Q8IVE0 287 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 LYZL4Q96KX0 146 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 SOX7Q9BT81 388 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 SLITRK2Q9H156 845 aa21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 ZNF629Q9UEG4 869 aaPredicted RBP21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 AK6Q9Y3D8 172 aaKnown RBP21.64■■□□□ 1.05
CAPNS1-215ENST00000628018 PDCD5O14737 125 aa21.63■■□□□ 1.05
CAPNS1-215ENST00000628018 MSTNO14793 375 aa21.63■■□□□ 1.05
CAPNS1-215ENST00000628018 LCATP04180 440 aa21.63■■□□□ 1.05
CAPNS1-215ENST00000628018 FSTP19883 344 aa21.63■■□□□ 1.05
CAPNS1-215ENST00000628018 CFL1P23528 166 aaKnown RBP21.63■■□□□ 1.05
CAPNS1-215ENST00000628018 PAX7P23759 505 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms