RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PSG7Q13046 419 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MAD2L1BPQ15013 274 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MEDAGQ5VYS4 303 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 OTPQ5XKR4 325 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 ZBTB49Q6ZSB9 765 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MEPCEQ7L2J0 689 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MRPL21Q7Z2W9 205 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 FTMTQ8N4E7 242 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 CBR4Q8N4T8 237 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 TCEANCQ8N8B7 351 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 SLC7A6Q92536 515 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 CMBLQ96DG6 245 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 ELMOD3Q96FG2 381 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 HRASLS5Q96KN8 279 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 ZNF582Q96NG8 517 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 TPK1Q9H3S4 243 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 SAP30LQ9HAJ7 183 aa11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 MYEF2Q9P2K5 600 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-216ENST00000626000 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 PRKYO43930 277 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 DCTDP32321 178 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 MPV17P39210 176 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 DDOSTP39656 456 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 NR4A2P43354 598 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 CARTPTQ16568 116 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 AADACL4Q5VUY2 407 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 PGAP1Q75T13 922 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF283Q8N7M2 679 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 OR13G1Q8NGZ3 307 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 MROQ9BYG7 248 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 PTTG3PQ9NZH4 202 aa11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNRPA1-216ENST00000626000 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 VWC2LB2RUY7 222 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 BAG2O95816 211 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 ALOX5APP20292 161 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 HTR1FP30939 366 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 OPRL1P41146 370 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 RPS27P42677 84 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CRYBB2P43320 205 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CX3CR1P49238 355 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CHN2P52757 468 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CDK5R2Q13319 367 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 RSPO1Q2MKA7 263 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 HFEQ30201 348 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 SLC25A30Q5SVS4 291 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 LYPD4Q6UWN0 246 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CLEC9AQ6UXN8 241 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 KLBQ86Z14 1044 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 OR8G5Q8NG78 346 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 FAM81AQ8TBF8 368 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 THEM6Q8WUY1 208 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 HPS1Q92902 700 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 TIMD4Q96H15 378 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 OR10A2Q9H208 303 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 IL19Q9UHD0 177 aa11.94□□□□□ -0.5
SNRPA1-216ENST00000626000 CHD3Q12873 2000 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 SELENOFO60613 162 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 IGHV1-46P01743 117 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 EPHA2P29317 976 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 NAA10P41227 235 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 SRP9P49458 86 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 PRKXP51817 358 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 PSMA6P60900 246 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 CCL8P80075 99 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 TNFAIP6P98066 277 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 ROM1Q03395 351 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 GK2Q14410 553 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF829Q3KNS6 432 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 KRT77Q7Z794 578 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 BBS1Q8NFJ9 593 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 SPRYD4Q8WW59 207 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 Q96MT0 163 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 VCXQ9H320 206 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 PCDHGB1Q9Y5G3 927 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 ACANP16112 2415 aa11.93□□□□□ -0.5
SNRPA1-216ENST00000626000 CCDC182A6NF36 153 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 CLDN25C9JDP6 229 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 SPRY3O43610 288 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 LY6HO94772 140 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 HPXP02790 462 aa11.92□□□□□ -0.5
SNRPA1-216ENST00000626000 TACSTD2P09758 323 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms