RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 IQCF6A8MYZ5 107 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 SOCS2O14508 198 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 TOX4O94842 621 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 PDCD1Q15116 288 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 MEP1BQ16820 701 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 TMPRSS11FQ6ZWK6 438 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 FAM122BQ7Z309 247 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 TMEM86BQ8N661 226 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 GJC3Q8NFK1 279 aa13.46□□□□□ -0.25
CD99-211ENST00000623253 RBM4BQ9BQ04 359 aaKnown RBP13.46□□□□□ -0.25
CD99-211ENST00000623253 CENPVL3A0A0U1RRI6 287 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 P2RY10O00398 339 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 FAM20BO75063 409 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 FSTL3O95633 263 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 NCK1P16333 377 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 CFHR2P36980 270 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 PSME3P61289 254 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 HOXA4Q00056 320 aaPredicted RBP13.45□□□□□ -0.26
CD99-211ENST00000623253 MAB21L1Q13394 359 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 PRAMEF6Q5VXH4 476 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 CD276Q5ZPR3 534 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 SFRP4Q6FHJ7 346 aaPredicted RBP13.45□□□□□ -0.26
CD99-211ENST00000623253 CORO6Q6QEF8 472 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 ZNF841Q6ZN19 808 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 RHOUQ7L0Q8 258 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 TBC1D15Q8TC07 691 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 SLC7A13Q8TCU3 470 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 SSMEM1Q8WWF3 244 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 GATAD2BQ8WXI9 593 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 FAM46AQ96IP4 442 aaKnown RBP13.45□□□□□ -0.26
CD99-211ENST00000623253 COQ7Q99807 217 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 HDHD2Q9H0R4 259 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 ERVK-18Q9QC07 812 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 ATPIF1Q9UII2 106 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 FAM32AQ9Y421 112 aaKnown RBP13.45□□□□□ -0.26
CD99-211ENST00000623253 IER3IP1Q9Y5U9 82 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 POMT1Q9Y6A1 747 aa13.45□□□□□ -0.26
CD99-211ENST00000623253 A0A1W2PRQ8 180 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 TNFRSF13BO14836 293 aaPredicted RBP13.44□□□□□ -0.26
CD99-211ENST00000623253 NDUFB2O95178 105 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
CD99-211ENST00000623253 SDHAP31040 664 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 PSMB10P40306 273 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 GATA4P43694 442 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 NPY4RP50391 375 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 DGCR6Q14129 220 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 MPPED2Q15777 294 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 ASPHD2Q6ICH7 369 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 C1QL4Q86Z23 238 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
CD99-211ENST00000623253 DYRK2Q92630 601 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 SLCO4A1Q96BD0 722 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 TSSK2Q96PF2 358 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 ELAC2Q9BQ52 826 aaKnown RBP13.44□□□□□ -0.26
CD99-211ENST00000623253 MYLK2Q9H1R3 596 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 SPAG4Q9NPE6 437 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 ACOXLQ9NUZ1 547 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 VSX1Q9NZR4 365 aaPredicted RBP13.44□□□□□ -0.26
CD99-211ENST00000623253 LHFPL6Q9Y693 200 aa13.44□□□□□ -0.26
CD99-211ENST00000623253 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 F5H5K5 113 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 GPR137BO60478 399 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 GMNNO75496 209 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 IGHV4-59P01825 116 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 LIPFP07098 398 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 RHCEP18577 417 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 PRDX6P30041 224 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 RAD23AP54725 363 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 MALLQ13021 153 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
CD99-211ENST00000623253 OR8G1Q15617 311 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 OR8B8Q15620 311 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 KCNMB1Q16558 191 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 TAF9Q16594 264 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 CLEC12AQ5QGZ9 265 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 PTCHD4Q6ZW05 846 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 TSEN54Q7Z6J9 526 aaKnown RBP13.43□□□□□ -0.26
CD99-211ENST00000623253 PDZD9Q8IXQ8 264 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 SCCPDHQ8NBX0 429 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 LINC01006Q8NI28 216 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 Q8TCH9 128 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 LHX4Q969G2 390 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 ERGIC1Q969X5 290 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 WDFY2Q96P53 400 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 TBX15Q96SF7 602 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 PITX2Q99697 317 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 TRIM15Q9C019 465 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 TCF7L1Q9HCS4 588 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 SRA1Q9HD15 236 aaKnown RBP13.43□□□□□ -0.26
CD99-211ENST00000623253 KRCC1Q9NPI7 259 aaPredicted RBP13.43□□□□□ -0.26
CD99-211ENST00000623253 NRIP3Q9NQ35 241 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 NDUFAF4Q9P032 175 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 RNF7Q9UBF6 113 aa13.43□□□□□ -0.26
CD99-211ENST00000623253 SAMD4AQ9UPU9 718 aaKnown RBP13.43□□□□□ -0.26
CD99-211ENST00000623253 IGHV1-69DA0A0B4J2H0 117 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms