RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 BVESQ8NE79 360 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR2M3Q8NG83 312 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR10R2Q8NGX6 335 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR6X1Q8NH79 312 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR1S1Q8NH92 325 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 MITD1Q8WV92 249 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 MRGPRFQ96AM1 343 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 FOXQ1Q9C009 403 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DNTTIP1Q9H147 329 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 RASL12Q9NYN1 266 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 LHFPL6Q9Y693 200 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 PHF3Q92576 2039 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 C9orf170A2RU37 121 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR5H14A6NHG9 310 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF878C9JN71 531 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 EIF1AYO14602 144 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 EFSO43281 561 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 BCL2L11O43521 198 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 TRAF3IP2O43734 574 aaPredicted RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SSX5O60225 188 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 IGHG1P01857 330 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 MYF5P13349 255 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 FKBP2P26885 142 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 GNALP38405 381 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 CASRP41180 1078 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 EIF1AXP47813 144 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 AFF3P51826 1226 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 CLRN1P58418 232 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 TAS2R31P59538 309 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 DCDP81605 110 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 FAM189A2Q15884 450 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 HIST3H3Q16695 136 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 PNLIPRP3Q17RR3 467 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SMUG1Q53HV7 270 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 ACTBL2Q562R1 376 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 JMJD6Q6NYC1 403 aaPredicted RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 TFAP2EQ6VUC0 442 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF574Q6ZN55 896 aaPredicted RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 PGAP1Q75T13 922 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 CPEB2Q7Z5Q1 589 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR5AS1Q8N127 324 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SPEM1Q8N4L4 309 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 FADS6Q8N9I5 356 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SLC38A9Q8NBW4 561 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 CHST4Q8NCG5 386 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR2AJ1Q8NGZ0 328 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SLC22A8Q8TCC7 542 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SLC25A43Q8WUT9 341 aaPredicted RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 PHYHIPLQ96FC7 376 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 OXGR1Q96P68 337 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 GAL3ST1Q99999 423 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 EMC6Q9BV81 110 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 SLC7A5P2Q9GIP4 190 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 CST11Q9H112 138 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 COMMD9Q9P000 198 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 MYEF2Q9P2K5 600 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 FBXL2Q9UKC9 423 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 VDAC3Q9Y277 283 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 NOP16Q9Y3C1 178 aaKnown RBP8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 WIF1Q9Y5W5 379 aa8.53□□□□□ -1.04
IGHV3-54-201ENST00000622166 ALPK2Q86TB3 2170 aa8.52□□□□□ -1.04
IGHV3-54-201ENST00000622166 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 RNF222A6NCQ9 220 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 CEACAM18A8MTB9 384 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SHISA8B8ZZ34 492 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 STK17BO94768 372 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 DUS4LO95620 317 aaKnown RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZNF20P17024 532 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 CTSSP25774 331 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ADH6P28332 368 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 HOXD11P31277 338 aaPredicted RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 FOXL2P58012 376 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SCGB2B2Q4G0G5 96 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 NSUN5P2Q63ZY6 315 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 TMEM81Q6P7N7 255 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 CFAP77Q6ZQR2 320 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 C17orf107Q6ZR85 190 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ACOT7LQ6ZUV0 252 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 MOB3CQ70IA8 216 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 NAA40Q86UY6 237 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 HOGA1Q86XE5 327 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ANGPTL5Q86XS5 388 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 PXT1Q8NFP0 134 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 KCNG3Q8TAE7 436 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SSC4DQ8WTU2 575 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 THAP3Q8WTV1 239 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms