RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	LAP3	P28838	519 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	DMWD	Q09019	674 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	TMEM225	Q6GV28	225 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	TMEM184A	Q6ZMB5	413 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ATG4D	Q86TL0	474 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	MARCH3	Q86UD3	253 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	MMAB	Q96EY8	250 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	CYYR1	Q96J86	154 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	GAL3ST4	Q96RP7	486 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ADO	Q96SZ5	270 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	AMDHD2	Q9Y303	409 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045		A0A1W2PPE2	198 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EFS	O43281	561 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZNF264	O43296	627 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	MELTF	P08582	738 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	GPX4	P36969	197 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	HGFAC	Q04756	655 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	C1orf61	Q13536	156 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ALG11	Q2TAA5	492 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	TTLL10	Q6ZVT0	673 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	TAAR8	Q969N4	342 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	RGCC	Q9H4X1	137 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	PNO1	Q9NRX1	252 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	CACFD1	Q9UGQ2	172 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	LMX1B	O60663	402 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	RAB5A	P20339	215 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	AGA	P20933	346 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	NPY4R	P50391	375 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	RIDA	P52758	137 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EEF1A1P5	Q5VTE0	462 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	KCTD18	Q6PI47	426 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045		Q6ZRG5	221 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EXD3	Q8N9H8	876 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	CD300LF	Q8TDQ1	290 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	OR8D2	Q9GZM6	311 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	B9D1	Q9UPM9	204 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EIF1AY	O14602	144 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EIF1AX	P47813	144 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	MFGE8	Q08431	387 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	COL19A1	Q14993	1142 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	C1QL3	Q5VWW1	255 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZNF679	Q8IYX0	411 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	OR8B4	Q96RC9	309 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	METTL8	Q9H825	291 aa	Known RBP	12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	SPACA1	Q9HBV2	294 aa		12.88	□□□□□ -0.35
SYNRG-231	ENST00000622045	EGR4	Q05215	589 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	SLC37A2	Q8TED4	501 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	BAD	Q92934	168 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	RAB33B	Q9H082	229 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	TAF9B	Q9HBM6	251 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	PRODH2	Q9UF12	536 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	VCAN	P13611	3396 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	KLF8	O95600	359 aa	Predicted RBP	12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	SFTPB	P07988	381 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	ASAH2B	P0C7U1	165 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	EMC4	Q5J8M3	183 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	CLEC9A	Q6UXN8	241 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	OR13C3	Q8NGS6	347 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	ASH2L	Q9UBL3	628 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	TICRR	Q7Z2Z1	1910 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	EML5	Q05BV3	1969 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	NUDT19	A8MXV4	375 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	AP4M1	O00189	453 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	CTSE	P14091	401 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	SELL	P14151	372 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	GNB3	P16520	340 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	HNRNPA2B1	P22626	353 aa	Known RBP	12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	FCAR	P24071	287 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	GPR3	P46089	330 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	SSBP1	Q04837	148 aa	Known RBP	12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	PDZD11	Q5EBL8	140 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045		Q6ZSR6	202 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZNF383	Q8NA42	475 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	LRRC75A	Q8NAA5	344 aa		12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	RPP25	Q9BUL9	199 aa	Known RBP	12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.87	□□□□□ -0.35
SYNRG-231	ENST00000622045	NME2P1	O60361	137 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	HOXB5	P09067	269 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	GNAL	P38405	381 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	GLP1R	P43220	463 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	GPM6B	Q13491	265 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	RAB32	Q13637	225 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	MEF2D	Q14814	521 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	ADGRE4P	Q86SQ3	457 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	NUDT9	Q9BW91	350 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	TOLLIP	Q9H0E2	274 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	CDC14C	A4D256	554 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	C17orf105	B2RV13	164 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	GSK3A	P49840	483 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	ADAMTS17	Q8TE56	1095 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	NRSN2	Q9GZP1	204 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	CENPM	Q9NSP4	180 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	WIF1	Q9Y5W5	379 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045		A6NCN8	305 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	WIPF3	A6NGB9	483 aa		12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045	ZNF729	A6NN14	1252 aa	Predicted RBP	12.86	□□□□□ -0.35
SYNRG-231	ENST00000622045		K7EQS6	105 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms