RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ISL1P61371 349 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 GK2Q14410 553 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 SMN1Q16637 294 aaKnown RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 Q5PR19 223 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 DNM1P46Q6ZS02 220 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 USP51Q70EK9 711 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 CMBLQ96DG6 245 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TRMT61AQ96FX7 289 aaKnown RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TUBG2Q9NRH3 451 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 PTTG3PQ9NZH4 202 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 PMF1-BGLAPU3KQ54 211 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 A0A1W2PQL4 384 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 H0YAE9 185 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 LCATP04180 440 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 DBTP11182 482 aaKnown RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 BMP4P12644 408 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 KITLGP21583 273 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 HSD11B1P28845 292 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 GCH1P30793 250 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 CAPGP40121 348 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF91Q05481 1191 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 POU4F2Q12837 409 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF684Q5T5D7 378 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TTC23Q5W5X9 447 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 SPNS3Q6ZMD2 512 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF679Q8IYX0 411 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 OR2AE1Q8NHA4 323 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 CNIH3Q8TBE1 160 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TFAP2CQ92754 450 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 COG8Q96MW5 612 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TBX5Q99593 518 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 VRK1Q99986 396 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 APOL4Q9BPW4 351 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 AMBNQ9NP70 447 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 PURGQ9UJV8 347 aaKnown RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TMEM14AQ9Y6G1 99 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ACANP16112 2415 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
CBWD3-217ENST00000621474 HIVEP1P15822 2718 aa12.21□□□□□ -0.45
CBWD3-217ENST00000621474 F8P00451 2351 aa12.21□□□□□ -0.45
CBWD3-217ENST00000621474 LILRA1O75019 489 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 OR2T7P0C7T2 308 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 RAC2P15153 192 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 IL5RAQ01344 420 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF92Q03936 586 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 TAF13Q15543 124 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 GLYATL3Q5SZD4 288 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 LAIR2Q6ISS4 152 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 DEGS2Q6QHC5 323 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.46
CBWD3-217ENST00000621474 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 Q6ZR03 302 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 OR2T27Q8NH04 317 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 ASB17Q8WXJ9 295 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 LGALS12Q96DT0 336 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 RNFT2Q96EX2 444 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 MNTQ99583 582 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 DYNLRB1Q9NP97 96 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 FAM206AQ9NX38 181 aa12.21□□□□□ -0.46
CBWD3-217ENST00000621474 MRM2Q9UI43 246 aaKnown RBP12.21□□□□□ -0.46
CBWD3-217ENST00000621474 SVEP1Q4LDE5 3571 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 TANC2Q9HCD6 1990 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 ZSCAN5BA6NJL1 495 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 H0YJX3 145 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 SRSF10O75494 262 aaKnown RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 NCR1O76036 304 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 EFNA4P52798 201 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 PSMA6P60900 246 aaKnown RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF85Q03923 595 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 KCTD18Q6PI47 426 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 KRT77Q7Z794 578 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 FBLIM1Q8WUP2 373 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 MROQ9BYG7 248 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 VCXQ9H320 206 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 MS4A5Q9H3V2 200 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 FBXO9Q9UK97 447 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 EXOGQ9Y2C4 368 aaKnown RBP12.2□□□□□ -0.46
CBWD3-217ENST00000621474 MED13LQ71F56 2210 aa12.2□□□□□ -0.46
CBWD3-217ENST00000621474 PHYHO14832 338 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 SSX4O60224 188 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 PNPP00491 289 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 DCTDP32321 178 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 MAGEB1P43366 347 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 SELENOVP59797 346 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms