RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CYYR1Q96J86 154 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 DUSP22Q9NRW4 184 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 B9D1Q9UPM9 204 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 UBE2J1Q9Y385 318 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PHF3Q92576 2039 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 MYO7BQ6PIF6 2116 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 A0A1W2PPC4 97 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 SERPINA5P05154 406 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CALCRP30988 508 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ID4P47928 161 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 MEX3BQ6ZN04 569 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 DPY19L2P2Q6ZN68 376 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 MOB3CQ70IA8 216 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 P4HA3Q7Z4N8 544 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 OR1J4Q8NGS1 313 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 OR13C9Q8NGT0 318 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 SEH1LQ96EE3 360 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 BIN3Q9NQY0 253 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ABI3Q9P2A4 366 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 DKKL1Q9UK85 242 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 HHLA2Q9UM44 414 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 SLC22A7Q9Y694 548 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 COL4A6Q14031 1691 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 RNF222A6NCQ9 220 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 OR4C45A6NMZ5 311 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 EIF3GO75821 320 aaKnown RBP eCLIP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PMS2P2O95744 297 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 IL33O95760 270 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PNPP00491 289 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 DAOP14920 347 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF43P17038 809 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 RHEBQ15382 184 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 TRIM61Q5EBN2 209 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF425Q6IV72 752 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 RTN4RL2Q86UN3 420 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PRSS35Q8N3Z0 413 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 BHLHE23Q8NDY6 225 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 OR51T1Q8NGJ9 327 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 SLC37A2Q8TED4 501 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ISOC2Q96AB3 205 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 OR2A5Q96R48 311 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CDC6Q99741 560 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 RSRP1Q9BUV0 290 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 NRSN2Q9GZP1 204 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PIGMQ9H3S5 423 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 BARX1Q9HBU1 254 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 TAS2R4Q9NYW5 299 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZMAT5Q9UDW3 170 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 KCNS2Q9ULS6 477 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CSAG2Q9Y5P2 127 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 TICRRQ7Z2Z1 1910 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 C1orf196B1AJZ1 125 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF749O43361 778 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 NUDT21O43809 227 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CNOT4O95628 575 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 HOXC12P31275 282 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CASRP41180 1078 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 HOXA1P49639 335 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PPT1P50897 306 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 TAS2R19P59542 299 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 BTG2P78543 158 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 POU3F1Q03052 451 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PRICKLE4Q2TBC4 344 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ACOT7LQ6ZUV0 252 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF440Q8IYI8 595 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ADAD2Q8NCV1 583 aaKnown RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ADAMTS18Q8TE60 1221 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 SFT2D1Q8WV19 159 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 RNF166Q96A37 237 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF587Q96SQ5 575 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 CLEC1BQ9P126 229 aa6.26□□□□□ -1.41
NEDD9-216ENST00000620854 NUP210Q8TEM1 1887 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-216ENST00000620854 PCNX3Q9H6A9 2034 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 MED19A0JLT2 244 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 LMX1BO60663 402 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 MPZL1O95297 269 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SNRNP70P08621 437 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PTGFRP43088 359 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 EMP2P54851 167 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ELAVL1Q15717 326 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 FAM209BQ5JX69 171 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 LINC00346Q8IVM7 164 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 KTI12Q96EK9 354 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 OR5B2Q96R09 309 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 LPAR4Q99677 370 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 KIR3DX1Q9H7L2 352 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF275Q9NSD4 429 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 NDRG3Q9UGV2 375 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 VSIG4Q9Y279 399 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 MRPS18BQ9Y676 258 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 OIP5O43482 229 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 BCL2L11O43521 198 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms