RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CA5BP1Q8WTZ4 195 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 LPAR4Q99677 370 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
FOXN3-219ENST00000615335 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CHST5Q9GZS9 411 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 FBXL4Q9UKA2 621 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CRTAPO75718 401 aaPredicted RBP11.71□□□□□ -0.54
FOXN3-219ENST00000615335 PPP1R3DO95685 299 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 DDAH2O95865 285 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 IFNA17P01571 189 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 SLC2A5P22732 501 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 CD82P27701 267 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 EMDP50402 254 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 NHLH2Q02577 135 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 SLC25A35Q3KQZ1 300 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 ACSM3Q53FZ2 586 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 RPTNQ6XPR3 784 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 PXKQ7Z7A4 578 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 C1QL4Q86Z23 238 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF615Q8N8J6 731 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 CYB561A3Q8NBI2 242 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 C16orf52Q8NHV5 167 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 GRHL3Q8TE85 626 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF721Q8TF20 911 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 FCAMRQ8WWV6 532 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 MARS2Q96GW9 593 aaKnown RBP11.71□□□□□ -0.54
FOXN3-219ENST00000615335 CLCC1Q96S66 551 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 ACKR4Q9NPB9 350 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 ASCL3Q9NQ33 180 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 MEPEQ9NQ76 525 aaPredicted RBP11.71□□□□□ -0.54
FOXN3-219ENST00000615335 TMEM100Q9NV29 134 aa11.71□□□□□ -0.54
FOXN3-219ENST00000615335 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.54
FOXN3-219ENST00000615335 MRPL15Q9P015 296 aaKnown RBP11.71□□□□□ -0.54
FOXN3-219ENST00000615335 LOC101059948A0A1B0GTJ6 334 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 C21orf140B9A014 251 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 AK1P00568 194 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 SLC25A4P12235 298 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 RAB5AP20339 215 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PYCR1P32322 319 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GABRA3P34903 492 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 SLC37A1P57057 533 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ACTC1P68032 377 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ACTA1P68133 377 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 OC90Q02509 493 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PJVKQ0ZLH3 352 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ZNHIT3Q15649 155 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GLT8D1Q68CQ7 371 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PAPD4Q6PIY7 484 aaKnown RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 NPSR1Q6W5P4 371 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 SDR9C7Q8NEX9 313 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PGLYRP3Q96LB9 341 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GPR61Q9BZJ8 451 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GXYLT2A0PJZ3 443 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GGT3PA6NGU5 568 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PAX1P15863 534 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 CPT2P23786 658 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 HMGN3Q15651 99 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 DMKNQ6E0U4 476 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-219ENST00000615335 OR10K2Q6IF99 312 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 IGF2-ASQ6U949 168 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ETV3LQ6ZN32 361 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 OR1N1Q8NGS0 311 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 OR2G2Q8NGZ5 317 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 NKD1Q969G9 470 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 NUDT9Q9BW91 350 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 GPR87Q9BY21 358 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 HAO2Q9NYQ3 351 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 PRODH2Q9UF12 536 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 WASF3Q9UPY6 502 aa11.7□□□□□ -0.54
FOXN3-219ENST00000615335 TRAV14DV4A0A0A6YYC5 116 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 CXorf65A6NEN9 183 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF705EA8MWA4 302 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-219ENST00000615335 FARS2O95363 451 aaKnown RBP11.69□□□□□ -0.54
FOXN3-219ENST00000615335 CD8AP01732 235 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 CLPSP04118 112 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 GYPBP06028 91 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 SLC6A6P31641 620 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 OTX2P32243 289 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 HNF4GQ14541 408 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 GFOD2Q3B7J2 385 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 SLC35D3Q5M8T2 416 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 DCAF12L2Q5VW00 463 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 OR52B4Q8NGK2 314 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 C15orf40Q8WUR7 153 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 GHSRQ92847 366 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF75AQ96N20 296 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms