RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 FAM71CQ8NEG0 241 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 GCM1Q9NP62 436 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 B9D1Q9UPM9 204 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 IL2RGP31785 369 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 NDUFA6P56556 154 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 IAH1Q2TAA2 248 aaPredicted RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 C9orf135Q5VTT2 229 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 CPNE4Q96A23 557 aaPredicted RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 HCCSP53701 268 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 SOHLH1Q5JUK2 328 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 LINC01555Q8NAE3 123 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 MSI2Q96DH6 328 aaKnown RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 RBMXL1Q96E39 390 aaKnown RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 SPACA9Q96E40 222 aaPredicted RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 GABRA2P47869 451 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 DSCR4P56555 118 aaPredicted RBP13.31□□□□□ -0.28
SNPH-203ENST00000614659 ZNF141Q15928 474 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 ZNF766Q5HY98 468 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 ST8SIA4Q92187 359 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 NRSN2Q9GZP1 204 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 OR51B6Q9H340 312 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 TIMM10BQ9Y5J6 103 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 DFFBO76075 338 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 CYC1P08574 325 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 RNF4P78317 190 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 C2orf76Q3KRA6 126 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
SNPH-203ENST00000614659 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 FAM213BQ8TBF2 198 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 GNG13Q9P2W3 67 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 SLC22A20A6NK97 555 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 SIX6O95475 246 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 CRYAAP02489 173 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 GZMMP51124 257 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 STARD6P59095 220 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 OR1C1Q15619 314 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PRICKLE4Q2TBC4 344 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 TMEM81Q6P7N7 255 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PLPP5Q8NEB5 264 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 OR52H1Q8NGJ2 320 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 TECTBQ96PL2 329 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 P4HTMQ9NXG6 502 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 HAO2Q9NYQ3 351 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 SLC17A2O00624 439 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PPP1R2P9O14990 202 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 ADRB1P08588 477 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 YRDCQ86U90 279 aaKnown RBP13.3□□□□□ -0.28
SNPH-203ENST00000614659 C1orf87Q8N0U7 546 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
SNPH-203ENST00000614659 SPNP16150 400 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 RAD52P43351 418 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 PRSS42Q7Z5A4 293 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 APOBEC4Q8WW27 367 aaKnown RBP13.3□□□□□ -0.28
SNPH-203ENST00000614659 OR8B4Q96RC9 309 aa13.3□□□□□ -0.28
SNPH-203ENST00000614659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNPH-203ENST00000614659 NUP205Q92621 2012 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 GALNSP34059 522 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 RBP2P50120 134 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 AADACL3Q5VUY0 350 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 ZNF547Q8IVP9 402 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 OTOSQ8NHW6 89 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 EMG1Q92979 244 aaKnown RBP13.29□□□□□ -0.28
SNPH-203ENST00000614659 TSLPQ969D9 159 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 YIPF5Q969M3 257 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 KIRREL1Q96J84 757 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 C12orf49Q9H741 205 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 MBD1Q9UIS9 605 aaPredicted RBP13.29□□□□□ -0.28
SNPH-203ENST00000614659 QDPRP09417 244 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 LGALS4P56470 323 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 ZNF845Q96IR2 970 aaPredicted RBP13.29□□□□□ -0.28
SNPH-203ENST00000614659 OR2A5Q96R48 311 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 PBOV1Q9GZY1 135 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 KPTNQ9Y664 436 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 MDFIC2A0A1B0GVS7 189 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 PRAMEF4O60810 478 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 CSRP3P50461 194 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 EMP3P54852 163 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 IRF3Q14653 427 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 GPNMBQ14956 572 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 ZNF425Q6IV72 752 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 OR4N2Q8NGD1 307 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 LIPHQ8WWY8 451 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 SIGLEC11Q96RL6 698 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 ATP23Q9Y6H3 246 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 XRCC2O43543 280 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 LIMS3P0CW19 117 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 LIMS4P0CW20 117 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 OR13C5Q8NGS8 318 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 NIT2Q9NQR4 276 aa13.29□□□□□ -0.28
SNPH-203ENST00000614659 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms