RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 KCNMB1Q16558 191 aa19.33■□□□□ 0.68
MMP28-203ENST00000612672 ZBED5Q49AG3 693 aa19.33■□□□□ 0.68
MMP28-203ENST00000612672 BOLLQ8N9W6 283 aaKnown RBP19.33■□□□□ 0.68
MMP28-203ENST00000612672 AHCYL1O43865 530 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 IRF2P14316 349 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 NPY4RP50391 375 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 ARF6P62330 175 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 SELENOWP63302 87 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 ELF3P78545 371 aaPredicted RBP19.32■□□□□ 0.68
MMP28-203ENST00000612672 PRB3Q04118 309 aaPredicted RBP19.32■□□□□ 0.68
MMP28-203ENST00000612672 COX10Q12887 443 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 TRAM2Q15035 370 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 BEND6Q5SZJ8 279 aaPredicted RBP19.32■□□□□ 0.68
MMP28-203ENST00000612672 AGBL2Q5U5Z8 902 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 Q6ZPA2 131 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 CFAP77Q6ZQR2 320 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 TMPRSS11FQ6ZWK6 438 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 MBOAT2Q6ZWT7 520 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 CELF2-AS1Q8N7Q2 184 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 ACOT11Q8WXI4 607 aaPredicted RBP19.32■□□□□ 0.68
MMP28-203ENST00000612672 TRIM15Q9C019 465 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 C16orf95Q9H693 158 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 NMNAT1Q9HAN9 279 aaPredicted RBP19.32■□□□□ 0.68
MMP28-203ENST00000612672 RPS6KA6Q9UK32 745 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 DNAH9Q9NYC9 4486 aa19.32■□□□□ 0.68
MMP28-203ENST00000612672 A0A1B0GW55 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 FAM220BPB1ANY3 271 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 LGALS8O00214 317 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 SOCS2O14508 198 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 ADAM20O43506 726 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 OR10H3O60404 316 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 ACSM4P0C7M7 580 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L2P0CJ85 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L3P0CJ86 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L4P0CJ87 422 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L5P0CJ88 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L6P0CJ89 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L7P0CJ90 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 SDHAP31040 664 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 CDKN2AP42771 156 aaKnown RBP19.31■□□□□ 0.68
MMP28-203ENST00000612672 METTL11BQ5VVY1 283 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 ERICH5Q6P6B1 374 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4L9Q6RFH8 374 aaPredicted RBP19.31■□□□□ 0.68
MMP28-203ENST00000612672 ZNF730Q6ZMV8 503 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 TSEN54Q7Z6J9 526 aaKnown RBP19.31■□□□□ 0.68
MMP28-203ENST00000612672 OR11L1Q8NGX0 322 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 FAM46AQ96IP4 442 aaKnown RBP19.31■□□□□ 0.68
MMP28-203ENST00000612672 FNDC11Q9BVV2 318 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 HDHD2Q9H0R4 259 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 NRIP3Q9NQ35 241 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 ERVK-18Q9QC07 812 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 DUX4Q9UBX2 424 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 POLR1DQ9Y2S0 133 aa19.31■□□□□ 0.68
MMP28-203ENST00000612672 COL7A1Q02388 2944 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 ELOVL7A1L3X0 281 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 C5orf63A6NC05 138 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 PTP4A3O75365 173 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 IFNA14P01570 189 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 DLX1P56177 255 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 POU4F2Q12837 409 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 CD276Q5ZPR3 534 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 LINC00346Q8IVM7 164 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 ERGIC1Q969X5 290 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 SLCO4A1Q96BD0 722 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 KIF17Q9P2E2 1029 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 RNF7Q9UBF6 113 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 SIGLEC7Q9Y286 467 aa19.3■□□□□ 0.68
MMP28-203ENST00000612672 NOTCH3Q9UM47 2321 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 IGLV1-36A0A0B4J1U3 117 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 PTBP3O95758 552 aaKnown RBP19.29■□□□□ 0.68
MMP28-203ENST00000612672 GYPAP02724 150 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 CA6P23280 308 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 EGR3Q06889 387 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 C2orf68Q2NKX9 166 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 ZNF826PQ6ZT77 177 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 BTN2A1Q7KYR7 527 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 RNF113BQ8IZP6 322 aaKnown RBP19.29■□□□□ 0.68
MMP28-203ENST00000612672 SCCPDHQ8NBX0 429 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 GJC3Q8NFK1 279 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 GPX7Q96SL4 187 aaPredicted RBP19.29■□□□□ 0.68
MMP28-203ENST00000612672 HCAR1Q9BXC0 346 aa19.29■□□□□ 0.68
MMP28-203ENST00000612672 PNRC2Q9NPJ4 139 aaKnown RBP19.29■□□□□ 0.68
MMP28-203ENST00000612672 MRASO14807 208 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 LIPFP07098 398 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 KPRPQ5T749 579 aaPredicted RBP19.28■□□□□ 0.68
MMP28-203ENST00000612672 SAMD5Q5TGI4 173 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 VMO1Q7Z5L0 202 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 FAM90A1Q86YD7 464 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 PNLDC1Q8NA58 520 aaKnown RBP19.28■□□□□ 0.68
MMP28-203ENST00000612672 SH3GL1Q99961 368 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 ZNRD1Q9P1U0 126 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 IER3IP1Q9Y5U9 82 aa19.28■□□□□ 0.68
MMP28-203ENST00000612672 IGHV3OR15-7A0A075B7D8 119 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 ZNF816-ZNF321PA0A0X1KG74 233 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 F5H5K5 113 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 TSPAN9O75954 239 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 NDUFB2O95178 105 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 PPP1R3DO95685 299 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 IFNW1P05000 195 aa19.27■□□□□ 0.68
MMP28-203ENST00000612672 CSF1P09603 554 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms