RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CMBLQ96DG6 245 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 RNFT2Q96EX2 444 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
CTSA-219ENST00000607841 PTTG3PQ9NZH4 202 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 KLHDC2Q9Y2U9 406 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
CTSA-219ENST00000607841 RPL36Q9Y3U8 105 aaKnown RBP12.22□□□□□ -0.45
CTSA-219ENST00000607841 HSPE1-MOB4S4R3N1 261 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 CREBBPQ92793 2442 aa12.22□□□□□ -0.45
CTSA-219ENST00000607841 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
CTSA-219ENST00000607841 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 ANXA2P07355 339 aaKnown RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 SELEP16581 610 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 KITLGP21583 273 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 DCTDP32321 178 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 MPV17P39210 176 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 EFNA4P52798 201 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 CXCR4P61073 352 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 ACTC1P68032 377 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 ACTA1P68133 377 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 PSG7Q13046 419 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 OR10H4Q8NGA5 316 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 OR8B4Q96RC9 309 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
CTSA-219ENST00000607841 IKZF2Q9UKS7 526 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 COPS3Q9UNS2 423 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 LRP12Q9Y561 859 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.45
CTSA-219ENST00000607841 SPG11Q96JI7 2443 aa12.21□□□□□ -0.46
CTSA-219ENST00000607841 ROS1P08922 2347 aa12.21□□□□□ -0.46
CTSA-219ENST00000607841 LRBAP50851 2863 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 XRCC2O43543 280 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 CLIC3O95833 236 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 IGHV4-39P01824 125 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 KRT8P05787 483 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 SLC2A1P11166 492 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 RIDAP52758 137 aaKnown RBP12.2□□□□□ -0.46
CTSA-219ENST00000607841 ZNF121P58317 390 aaPredicted RBP12.2□□□□□ -0.46
CTSA-219ENST00000607841 PCGF3Q3KNV8 242 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 Q5PR19 223 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 PGAP1Q75T13 922 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 MRPL21Q7Z2W9 205 aaKnown RBP12.2□□□□□ -0.46
CTSA-219ENST00000607841 C8orf59Q8N0T1 100 aaPredicted RBP12.2□□□□□ -0.46
CTSA-219ENST00000607841 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 OR10A2Q9H208 303 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 POFUT1Q9H488 388 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 AASSQ9UDR5 926 aa12.2□□□□□ -0.46
CTSA-219ENST00000607841 PURGQ9UJV8 347 aaKnown RBP12.2□□□□□ -0.46
CTSA-219ENST00000607841 PDZD2O15018 2839 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 POLQO75417 2590 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 A0A1W2PQL4 384 aaPredicted RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 ACOD1A6NK06 481 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 C17orf100A8MU93 164 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 TBX1O43435 398 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 APOL3O95236 402 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 FADS2O95864 444 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 DBTP11182 482 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 NAT2P11245 290 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 ZNF81P51508 661 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 DSCR9P59020 149 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 ISL1P61371 349 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 ZNF91Q05481 1191 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 RAB40BQ12829 278 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 GK2Q14410 553 aaPredicted RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 HLXQ14774 488 aaPredicted RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 TESK1Q15569 626 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 TIGD6Q17RP2 521 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 ZNF829Q3KNS6 432 aaPredicted RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 USP51Q70EK9 711 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 ACBD7Q8N6N7 88 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 APH1BQ8WW43 257 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 MRPL48Q96GC5 212 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 PGAM5Q96HS1 289 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 SORCS2Q96PQ0 1159 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 TBX5Q99593 518 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 RGCCQ9H4X1 137 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 ZDHHC8Q9ULC8 765 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
CTSA-219ENST00000607841 DSCAMO60469 2012 aa12.19□□□□□ -0.46
CTSA-219ENST00000607841 TMEM269A0A1B0GVZ9 245 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 DAPL1A0PJW8 107 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 IRGMA1A4Y4 181 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 PSMD9O00233 223 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 SSX4O60224 188 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms