RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ICMTO60725 284 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 SULT1C4O75897 302 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 TNFAIP8O95379 198 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 MT-ND5P03915 603 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 LCATP04180 440 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 LCKP06239 509 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 NR4A1P22736 598 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 KIR3DL2P43630 455 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 GTF2A1P52655 376 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 UCP2P55851 309 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 PRSS12P56730 875 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 NANOS3P60323 173 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 PPP1CBP62140 327 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 NKX6-1P78426 367 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 IRF3Q14653 427 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 GFOD2Q3B7J2 385 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF829Q3KNS6 432 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF787Q6DD87 383 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF773Q6PK81 442 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 TMPRSS11AQ6ZMR5 421 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF704Q6ZNC4 412 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 COLCA1Q6ZS62 124 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 PRSS48Q7RTY5 328 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 KLBQ86Z14 1044 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 SYS1Q8N2H4 156 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 PRSS35Q8N3Z0 413 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 NANOGP1Q8N7R0 232 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF485Q8NCK3 441 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 IL17RDQ8NFM7 739 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 OR1J1Q8NGS3 322 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 OR52N1Q8NH53 320 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 OR2AE1Q8NHA4 323 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 LILRB1Q8NHL6 650 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 SPRYD4Q8WW59 207 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 GATAD2BQ8WXI9 593 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 RORBQ92753 470 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 PPP1R14AQ96A00 147 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 MRPL48Q96GC5 212 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 PGAM5Q96HS1 289 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 OR5M11Q96RB7 305 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 DCLRE1CQ96SD1 692 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 MND1Q9BWT6 205 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 C1QTNF5Q9BXJ0 243 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 YTHDF1Q9BYJ9 559 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 NIPAL2Q9H841 368 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 CHCHD3Q9NX63 227 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 PTTG3PQ9NZH4 202 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ZNF319Q9P2F9 582 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 EIF3KQ9UBQ5 218 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 POU2F3Q9UKI9 436 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 FZR1Q9UM11 496 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 LSM2Q9Y333 95 aaKnown RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 CAB39Q9Y376 341 aaPredicted RBP6.62□□□□□ -1.35
MSH6-211ENST00000606499 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 R4GMQ9 66 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 DOPEY2Q9Y3R5 2298 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ABCA12Q86UK0 2595 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 ICE1Q9Y2F5 2266 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 PNMA8CA0A1B0GUJ8 204 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 TRIM64A6NGJ6 449 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 E7EQL1 145 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 CTAG2O75638 210 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 APOC1P02654 83 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 TTRP02766 147 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 TACSTD2P09758 323 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 PCSK6P29122 969 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 DCTDP32321 178 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 THBS4P35443 961 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 MPV17P39210 176 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 RGS6P49758 472 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 MMP16P51512 607 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 WNT4P56705 351 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 EMX1Q04741 257 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 MED22Q15528 200 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 TBCEQ15813 527 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 ODF4Q2M2E3 257 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 ZNF672Q499Z4 452 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 TMEM255AQ5JRV8 349 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 WDR38Q5JTN6 314 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 GLYATL3Q5SZD4 288 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 BCL2L15Q5TBC7 163 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 RNLSQ5VYX0 342 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 ARL9Q6T311 187 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 KCTD20Q7Z5Y7 419 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 CATSPERDQ86XM0 798 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 ZNF295-AS1Q8N0V1 137 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 SPARTQ8N0X7 666 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 ZFP41Q8N8Y5 198 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 NUP37Q8NFH4 326 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 OR8B12Q8NGG6 310 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 OR2G2Q8NGZ5 317 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 SLC25A40Q8TBP6 338 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 TMEM171Q8WVE6 324 aa6.61□□□□□ -1.35
MSH6-211ENST00000606499 APOBEC3DQ96AK3 386 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
MSH6-211ENST00000606499 OR2J1Q9GZK6 312 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms