RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
CSMD1-217ENST00000602723 CTSFQ9UBX1 484 aa8.77□□□□□ -1.01
CSMD1-217ENST00000602723 CCL26Q9Y258 94 aa8.77□□□□□ -1.01
CSMD1-217ENST00000602723 COA3Q9Y2R0 106 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-217ENST00000602723 SSC5DA1L4H1 1573 aa8.77□□□□□ -1.01
CSMD1-217ENST00000602723 ZC3H12DA2A288 527 aaKnown RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 ARNTP27540 789 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 APOBEC1P41238 236 aaKnown RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 VAMP8Q9BV40 100 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 HMGN4O00479 90 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TRNP1Q6NT89 227 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 BOD1Q96IK1 185 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 RNF186Q9NXI6 227 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 CXCL12P48061 93 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 RBM45Q8IUH3 476 aaKnown RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 FUNDC1Q8IVP5 155 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 CIB3Q96Q77 187 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TWSG1Q9GZX9 223 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 ABHD17CQ6PCB6 329 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 RXFP4Q8TDU9 374 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 DCBLD2Q96PD2 775 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 UCK1Q9HA47 277 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SNRPGP15A8MWD9 76 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 BCL2L11O43521 198 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 ZP3P21754 424 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 FGF7P21781 194 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 CYB561P49447 251 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 AGBL4Q5VU57 503 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 FAAP20Q6NZ36 180 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 DGAT2L6Q6ZPD8 337 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SLC22A12Q96S37 553 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 GMLQ99445 158 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 GPX5O75715 221 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SFTA3P0C7M3 94 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 ZNF528Q3MIS6 628 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 CMTM4Q8IZR5 234 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 STRCQ7RTU9 1775 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 M0R082 166 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 LRP3O75074 770 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 OR5G3P0C626 314 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TCN2P20062 427 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 RBP2P50120 134 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 PIGPP57054 158 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 THEM4Q5T1C6 240 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 OLIG3Q7RTU3 272 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 C11orf42Q8N5U0 333 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 AKR1E2Q96JD6 320 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TUBAL3A6NHL2 446 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SDCBPO00560 298 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 AKR7A2O43488 359 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 B4GALT3O60512 393 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 NRASP01111 189 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TBXA2RP21731 343 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 FAM71E1Q6IPT2 247 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 OR5AS1Q8N127 324 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 PLXNA1Q9UIW2 1896 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TRAV20A0A0B4J274 112 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 IAPPP10997 89 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 ZNF750Q32MQ0 723 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 MORN1Q5T089 497 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 TSEN54Q7Z6J9 526 aaKnown RBP8.76□□□□□ -1.01
CSMD1-217ENST00000602723 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 LANCL2Q9NS86 450 aa8.76□□□□□ -1.01
CSMD1-217ENST00000602723 PLPP1O14494 284 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 UBE2MP61081 183 aaKnown RBP8.75□□□□□ -1.01
CSMD1-217ENST00000602723 DUSP5Q16690 384 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ZBTB37Q5TC79 503 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 CPEB3Q8NE35 698 aaKnown RBP8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ARSGQ96EG1 525 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 C12orf10Q9HB07 376 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 SLC17A4Q9Y2C5 497 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 NCR3LG1Q68D85 454 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 RLN3Q8WXF3 142 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ANKRD10Q9NXR5 420 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ASIC5Q9NY37 505 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-217ENST00000602723 AMTP48728 403 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ACKR1Q16570 336 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 XKR7Q5GH72 579 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 TMEM81Q6P7N7 255 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 PAQR6Q6TCH4 344 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 LINC00696Q6ZRV3 163 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 LHFPL2Q6ZUX7 228 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 FAM26EQ8N5C1 309 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 OR51E1Q8TCB6 317 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 BCO1Q9HAY6 547 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 PLEKHA2Q9HB19 425 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ARRB2P32121 409 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ZNF740Q8NDX6 193 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 ZC3HAV1LQ96H79 300 aaKnown RBP8.75□□□□□ -1.01
CSMD1-217ENST00000602723 TEAD3Q99594 435 aa8.75□□□□□ -1.01
CSMD1-217ENST00000602723 GPR84Q9NQS5 396 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms