RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CD200P41217 278 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 CENPAP49450 140 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 NUDT2P50583 147 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 HOXA4Q00056 320 aaPredicted RBP14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 WDR25Q64LD2 544 aaPredicted RBP14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 C16orf87Q6PH81 154 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 DNM1P34Q6PK57 102 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 LINC00346Q8IVM7 164 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 NUDT16L1Q9BRJ7 211 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 CDADC1Q9BWV3 514 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 OR52D1Q9H346 318 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 OR6C68A6NDL8 312 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 LRRC30A6NM36 301 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 TNFRSF13BO14836 293 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 ANOS1P23352 680 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 PSMB10P40306 273 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 PITPNBP48739 271 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 C1orf87Q8N0U7 546 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 OR8B3Q8NGG8 313 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 OR10S1Q8NGN2 331 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 OR4K13Q8NH42 304 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 ERGIC1Q969X5 290 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 PLEKHA8Q96JA3 519 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 OR8B2Q96RD0 313 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 HCAR1Q9BXC0 346 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 SLITRK2Q9H156 845 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 MYLK2Q9H1R3 596 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 GORASP2Q9H8Y8 452 aa14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 MRPL22Q9NWU5 206 aaKnown RBP14.98□□□□□ -0.01
CHMP2A-208ENST00000601220 TRAV40A0A0B4J280 105 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 C22orf46C9J442 243 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 F5H5K5 113 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 FAM20BO75063 409 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 PTBP3O95758 552 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 MDKP21741 143 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 TRAP1Q12931 704 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 ECH1Q13011 328 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 MPPED2Q15777 294 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 DEFB112Q30KQ8 113 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 BRD3OSQ6XYD6 125 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 DCDC5Q6ZRR9 648 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 C19orf18Q8NEA5 215 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 FANK1Q8TC84 345 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 SLCO4A1Q96BD0 722 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 MAP6Q96JE9 813 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 DDOQ99489 341 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 PITX2Q99697 317 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 ATF6BQ99941 703 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 KRCC1Q9NPI7 259 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 RPRD1BQ9NQG5 326 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 SAMD4AQ9UPU9 718 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 MMP24Q9Y5R2 645 aa14.97□□□□□ -0.01
CHMP2A-208ENST00000601220 PHYHO14832 338 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 HOXA3O43365 443 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 SLC6A6P31641 620 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 GSSP48637 474 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 FGF12P61328 243 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 PRAMEF6Q5VXH4 476 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 TREML4Q6UXN2 200 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 NLRC3Q7RTR2 1065 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 TMIGD2Q96BF3 282 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 CTSZQ9UBR2 303 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 CLN8Q9UBY8 286 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 TMCC3Q9ULS5 477 aa14.96□□□□□ -0.01
CHMP2A-208ENST00000601220 C5orf63A6NC05 138 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 RENP00797 406 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 LCATP04180 440 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 PSKH1P11801 424 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 SLC36A3Q495N2 470 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 RNF148Q8N7C7 305 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNRF4Q8WWF5 429 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 PYURFQ96I23 114 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 IFT27Q9BW83 186 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 FN3KQ9H479 309 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 SPAG4Q9NPE6 437 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 UFSP2Q9NUQ7 469 aa14.95□□□□□ -0.02
CHMP2A-208ENST00000601220 SRRM5B3KS81 715 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 IDH3BO43837 385 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 GADD45GO95257 159 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 MMP9P14780 707 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 CA6P23280 308 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 OMGP23515 440 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 OTX1P32242 354 aaPredicted RBP14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 SMIM11AP58511 58 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 BPIFB3P59826 476 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNF92Q03936 586 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 KRT72Q14CN4 511 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNF362Q5T0B9 420 aaPredicted RBP14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 Q6YL49 198 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 PGAP1Q75T13 922 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 SDR9C7Q8NEX9 313 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 OR11L1Q8NGX0 322 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 OR2AJ1Q8NGZ0 328 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 CMTM5Q96DZ9 223 aa14.94□□□□□ -0.02
CHMP2A-208ENST00000601220 CD300LBA8K4G0 201 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 FCN3O75636 299 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 SFTPBP07988 381 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 IRF2P14316 349 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 PRDX6P30041 224 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 CFHR2P36980 270 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms