RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ORC6Q9Y5N6 252 aa14.34□□□□□ -0.11
TRIM28-215ENST00000601150 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 IGHV1-69-2A0A0G2JMI3 117 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 M0R129 80 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 TLX2O43763 284 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-215ENST00000601150 CDC14BO60729 498 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 RP2O75695 350 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 CD55P08174 381 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 NAA10P41227 235 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-215ENST00000601150 CRYBB2P43320 205 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 PRKXP51817 358 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 EFNB1P98172 346 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 TMEM249Q2WGJ8 235 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 OR2T2Q6IF00 324 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 USP51Q70EK9 711 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 RHOUQ7L0Q8 258 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 ZNF283Q8N7M2 679 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 OTOSQ8NHW6 89 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 TEAD3Q99594 435 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-215ENST00000601150 USE1Q9NZ43 259 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 TLN2Q9Y4G6 2542 aa14.33□□□□□ -0.12
TRIM28-215ENST00000601150 CCDC182A6NF36 153 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 IQCF6A8MYZ5 107 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 EI24O14681 340 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 APOC1P02654 83 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 ALPLP05186 524 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 LYNP07948 512 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 TACSTD2P09758 323 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 SELEP16581 610 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 TNFSF4P23510 183 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 HSD11B1P28845 292 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 POLR2IP36954 125 aaKnown RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 GPR6P46095 362 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 TMEM33P57088 247 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 TNFAIP6P98066 277 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 GK2Q14410 553 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 Q6ZR03 302 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 SLC16A9Q7RTY1 509 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 MRPL21Q7Z2W9 205 aaKnown RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 OR5AS1Q8N127 324 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 OR8G5Q8NG78 346 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 OR2Z1Q8NG97 314 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 THEM6Q8WUY1 208 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 ELMOD3Q96FG2 381 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 ZNF582Q96NG8 517 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 AMELYQ99218 206 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 YIPF3Q9GZM5 350 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 H2AFY2Q9P0M6 372 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 ABCA1O95477 2261 aa14.32□□□□□ -0.12
TRIM28-215ENST00000601150 NSD1Q96L73 2696 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-215ENST00000601150 CSPG4Q6UVK1 2322 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 CD5LO43866 347 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 H2BFMP0C1H6 154 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 OPRL1P41146 370 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 CX3CR1P49238 355 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 CHN2P52757 468 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 RAD23AP54725 363 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 RIPPLY3P57055 190 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 HFEQ30201 348 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 SNAI3Q3KNW1 292 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 AADACL4Q5VUY2 407 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 NXNL2Q5VZ03 156 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 PGAP1Q75T13 922 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 MEPCEQ7L2J0 689 aaKnown RBP14.31□□□□□ -0.12
TRIM28-215ENST00000601150 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.31□□□□□ -0.12
TRIM28-215ENST00000601150 GID4Q8IVV7 300 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 PQLC1Q8N2U9 271 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 CBR4Q8N4T8 237 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 OR13G1Q8NGZ3 307 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 STMN2Q93045 179 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 IL4I1Q96RQ9 567 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 SP140LQ9H930 580 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 LAMP5Q9UJQ1 280 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 KLHDC2Q9Y2U9 406 aa14.31□□□□□ -0.12
TRIM28-215ENST00000601150 SETD2Q9BYW2 2564 aaPredicted RBP14.3□□□□□ -0.12
TRIM28-215ENST00000601150 DYSFO75923 2080 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 SLC22A31A6NKX4 558 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 PPIHO43447 177 aaKnown RBP14.3□□□□□ -0.12
TRIM28-215ENST00000601150 LILRA1O75019 489 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 ANXA2P07355 339 aaKnown RBP14.3□□□□□ -0.12
TRIM28-215ENST00000601150 SLC2A1P11166 492 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 ALOX5APP20292 161 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 ALDH3A2P51648 485 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 TRIP10Q15642 601 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 GLYATL3Q5SZD4 288 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 BCDIN3DQ7Z5W3 292 aaKnown RBP14.3□□□□□ -0.12
TRIM28-215ENST00000601150 BHLHE23Q8NDY6 225 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 SLC30A2Q9BRI3 323 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 C9orf16Q9BUW7 83 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 N6AMT1Q9Y5N5 214 aa14.3□□□□□ -0.12
TRIM28-215ENST00000601150 LRP5LA4QPB2 252 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 C5orf63A6NC05 138 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 XRCC2O43543 280 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 BAG2O95816 211 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 MRPL3P09001 348 aaKnown RBP14.29□□□□□ -0.12
TRIM28-215ENST00000601150 IGHV4-31P0DP07 118 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 GZMKP49863 264 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 PRSS12P56730 875 aa14.29□□□□□ -0.12
TRIM28-215ENST00000601150 ZNF92Q03936 586 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms