RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ABOP16442 354 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 UBE2NLQ5JXB2 153 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 TRIQKQ629K1 86 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 C19orf18Q8NEA5 215 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 OR51D1Q8NGF3 324 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 OR1J2Q8NGS2 313 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 SPTSSAQ969W0 71 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 ADAT3Q96EY9 351 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-218ENST00000600383 ZNF799Q96GE5 643 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 CGGBP1Q9UFW8 167 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-218ENST00000600383 STEAP1Q9UHE8 339 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 PCDHGA9Q9Y5G4 932 aaKnown RBP13.3□□□□□ -0.28
HIF3A-218ENST00000600383 TIMM10BQ9Y5J6 103 aa13.3□□□□□ -0.28
HIF3A-218ENST00000600383 DOCK7Q96N67 2140 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 IGFBP3P17936 291 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-218ENST00000600383 CTSSP25774 331 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 INPP1P49441 399 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 PSG4Q00888 419 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 SCRN3Q0VDG4 424 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 SFRP5Q5T4F7 317 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 IGFL3Q6UXB1 125 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 GDPD3Q7L5L3 318 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 JAGN1Q8N5M9 183 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 TRIB1Q96RU8 372 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 LINC00470Q9BZP3 86 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 HDHD2Q9H0R4 259 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 RNF121Q9H920 327 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 LUZP4Q9P127 313 aa13.29□□□□□ -0.28
HIF3A-218ENST00000600383 MAP1BP46821 2468 aaKnown RBP13.28□□□□□ -0.28
HIF3A-218ENST00000600383 DLL1O00548 723 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 SSX4O60224 188 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 SPNP16150 400 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 PTBP1P26599 531 aaKnown RBP eCLIP13.28□□□□□ -0.28
HIF3A-218ENST00000600383 RAB35Q15286 201 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 RNASE12Q5GAN4 147 aaKnown RBP13.28□□□□□ -0.28
HIF3A-218ENST00000600383 GLYATL3Q5SZD4 288 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 PRSS45Q7RTY3 260 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 MINDY2Q8NBR6 621 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 OR5D14Q8NGL3 314 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 OR1F12Q8NHA8 337 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 WACQ9BTA9 647 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 RNF122Q9H9V4 155 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 SYNGR3O43761 229 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 CALCBP10092 127 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 ZNF20P17024 532 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 HTR5AP47898 357 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 PCBD1P61457 104 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 SPACA3Q8IXA5 215 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 GCNT2Q8N0V5 402 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 OR13C9Q8NGT0 318 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 S100A16Q96FQ6 103 aaKnown RBP13.28□□□□□ -0.28
HIF3A-218ENST00000600383 OR2H1Q9GZK4 316 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 KCNK15Q9H427 330 aa13.28□□□□□ -0.28
HIF3A-218ENST00000600383 ANKRD11Q6UB99 2663 aaPredicted RBP13.27□□□□□ -0.28
HIF3A-218ENST00000600383 OR6C65A6NJZ3 312 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 PTTG1O95997 202 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 AGTR1P30556 359 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 ART1P52961 327 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 PLA2G7Q13093 441 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 C2orf76Q3KRA6 126 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 MTFR2Q6P444 385 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 SLC25A38Q96DW6 304 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 THAP7Q9BT49 309 aaPredicted RBP13.27□□□□□ -0.28
HIF3A-218ENST00000600383 MRI1Q9BV20 369 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 PRDM14Q9GZV8 571 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 SP140LQ9H930 580 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 PLEKHA1Q9HB21 404 aa13.27□□□□□ -0.28
HIF3A-218ENST00000600383 MYEF2Q9P2K5 600 aaKnown RBP13.27□□□□□ -0.28
HIF3A-218ENST00000600383 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 MEGF11A6BM72 1044 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 EEF1E1O43324 174 aaKnown RBP13.27□□□□□ -0.29
HIF3A-218ENST00000600383 APOC1P02654 83 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 FSTP19883 344 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-218ENST00000600383 TPTEP56180 551 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 RIN1Q13671 783 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 RAB11BQ15907 218 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 ZNF57Q68EA5 555 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-218ENST00000600383 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-218ENST00000600383 FAM3DQ96BQ1 224 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 SARAFQ96BY9 339 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 SLC17A5Q9NRA2 495 aa13.27□□□□□ -0.29
HIF3A-218ENST00000600383 CACNA1GO43497 2377 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 SLC17A2O00624 439 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 AQP7O14520 342 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 HLA-HP01893 362 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 LCATP04180 440 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 FCGR2AP12318 317 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 RAB3AP20336 220 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 SDHBP21912 280 aa13.26□□□□□ -0.29
HIF3A-218ENST00000600383 HTR2CP28335 458 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms