RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 MRPL21Q7Z2W9 205 aaKnown RBP8.22□□□□□ -1.09
VRK3-216ENST00000599342 KLBQ86Z14 1044 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 ZDHHC21Q8IVQ6 265 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 SIGLECL1Q8N7X8 197 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 PROKR2Q8NFJ6 384 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 OR8B3Q8NGG8 313 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 OR4C15Q8NGM1 316 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 OR11L1Q8NGX0 322 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 SGMS2Q8NHU3 365 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 SPRYD4Q8WW59 207 aaPredicted RBP8.22□□□□□ -1.09
VRK3-216ENST00000599342 DVL3Q92997 716 aaPredicted RBP8.22□□□□□ -1.09
VRK3-216ENST00000599342 SPTSSAQ969W0 71 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 NEIL1Q96FI4 390 aaPredicted RBP8.22□□□□□ -1.09
VRK3-216ENST00000599342 OR8B2Q96RD0 313 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 CDRT15Q96T59 188 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 ZMAT3Q9HA38 289 aaKnown RBP8.22□□□□□ -1.09
VRK3-216ENST00000599342 ZNF69Q9UC07 566 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 CYB5R1Q9UHQ9 305 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 TAGLN3Q9UI15 199 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 KCNG2Q9UJ96 466 aa8.22□□□□□ -1.09
VRK3-216ENST00000599342 M0R135 149 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 DCTN3O75935 186 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 KRT36O76013 467 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 FSTL3O95633 263 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 WNT2P09544 360 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 PRTN3P24158 256 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 GGT2P36268 569 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 GATA4P43694 442 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 GSSP48637 474 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 DBPQ10586 325 aaPredicted RBP8.21□□□□□ -1.1
VRK3-216ENST00000599342 FOXL1Q12952 345 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 BAMBIQ13145 260 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 OR8G1Q15617 311 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 KRTAP27-1Q3LI81 207 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 ZNF404Q494X3 552 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 SPATS1Q496A3 300 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 PGBD2Q6P3X8 592 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 DOK3Q7L591 496 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 DEFB107AQ8IZN7 70 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 PARP8Q8N3A8 854 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 LINC00471Q8N535 108 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 CELF2-AS1Q8N7Q2 184 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 OR9Q2Q8NGE9 314 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 OR2T4Q8NH00 348 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 ERGIC1Q969X5 290 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 SLCO4A1Q96BD0 722 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 ZNF799Q96GE5 643 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 DUX5Q96PT3 197 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 TMEM246Q9BRR3 403 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 SLC22A4Q9H015 551 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 EGLN3Q9H6Z9 239 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 TMEM165Q9HC07 324 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 PNRC2Q9NPJ4 139 aaKnown RBP8.21□□□□□ -1.1
VRK3-216ENST00000599342 TBC1D23Q9NUY8 699 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 CD300AQ9UGN4 299 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 CDH10Q9Y6N8 788 aa8.21□□□□□ -1.1
VRK3-216ENST00000599342 TRAV40A0A0B4J280 105 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 IGHV2-70DA0A0C4DH43 119 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 A0A1B0GWJ7 208 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 DNAJC9-AS1A6NH13 148 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 TNFRSF11BO00300 401 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 SPRY1O43609 319 aaPredicted RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 PPIAL4GP0DN37 164 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 PYCR1P32322 319 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 CD200P41217 278 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 RPS27P42677 84 aaKnown RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 MTNR1AP48039 350 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 PITPNBP48739 271 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 PAX8Q06710 450 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 TAF13Q15543 124 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 KCNJ8Q15842 424 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 RSPO1Q2MKA7 263 aaPredicted RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 KLF17Q5JT82 389 aaPredicted RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 FAM201AQ5SY85 155 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 DCDC5Q6ZRR9 648 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 NAA40Q86UY6 237 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 BCL6BQ8N143 479 aaPredicted RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 CYB561A3Q8NBI2 242 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 Q8TCH9 128 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 RAB40AQ8WXH6 277 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 SLC25A28Q96A46 364 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 MAP6Q96JE9 813 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 COPS4Q9BT78 406 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 FN3KRPQ9HA64 309 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 UFSP2Q9NUQ7 469 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 ARL8BQ9NVJ2 186 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 MRPL22Q9NWU5 206 aaKnown RBP8.2□□□□□ -1.1
VRK3-216ENST00000599342 CLN8Q9UBY8 286 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 ARL2BPQ9Y2Y0 163 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 LYVE1Q9Y5Y7 322 aa8.2□□□□□ -1.1
VRK3-216ENST00000599342 IGHV3OR16-10A0A075B7F0 116 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 GGT3PA6NGU5 568 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 TVP23AA6NH52 213 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 CD300LBA8K4G0 201 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 BHLHE40O14503 412 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 PHYHO14832 338 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 FAM20BO75063 409 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 CCNB2O95067 398 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms