RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 PSORS1C1Q9UIG5 152 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 J3QRE1 110 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 MPZL1O95297 269 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 CRHBPP24387 322 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 GPR6P46095 362 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 RPS7P62081 194 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 LSM6P62312 80 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 IL13RA1P78552 427 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 EFNB3Q15768 340 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 SIGLECL1Q8N7X8 197 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 BPIFB6Q8NFQ5 453 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 OR1K1Q8NGR3 316 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 OR6K6Q8NGW6 343 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 C11orf40Q8WZ69 217 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 GGHQ92820 318 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 LGALS12Q96DT0 336 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 RNFT2Q96EX2 444 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 DUSP21Q9H596 190 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 SIAEQ9HAT2 523 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 ADGRL4Q9HBW9 690 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 COMMD3-BMI1R4GMX3 469 aa11.86□□□□□ -0.51
SHKBP1-218ENST00000598907 TRAV20A0A0B4J274 112 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 IGHV1-18A0A0C4DH31 117 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 A0A1W2PPL8 197 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 TVP23AA6NH52 213 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 SBK2P0C263 348 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 PSKH1P11801 424 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 PIPP12273 146 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 MDKP21741 143 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 MSR1P21757 451 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 RAB40BQ12829 278 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 POU4F2Q12837 409 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 ENDOGQ14249 297 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 ANKRD16Q6P6B7 361 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC16A9Q7RTY1 509 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 C1orf162Q8NEQ5 155 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 WDR76Q9H967 626 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 SEC61A2Q9H9S3 476 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 FGF20Q9NP95 211 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 CNOT2Q9NZN8 540 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 KCNG2Q9UJ96 466 aa11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 FBXO9Q9UK97 447 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-218ENST00000598907 EFCAB10A6NFE3 127 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SELENOFO60613 162 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 FAM20BO75063 409 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 CRYAAP02489 173 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 CST2P09228 141 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 OR8G3PP0DMU2 310 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 B4GALT1P15291 398 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 ENTPD1P49961 510 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC35A2P78381 396 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SGCAQ16586 387 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 MEP1BQ16820 701 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 KLHL22Q53GT1 634 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF813Q6ZN06 617 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 C17orf78Q8N4C9 275 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 OR4F15Q8NGB8 312 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 OR51G2Q8NGK0 314 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 OR52I1Q8NGK6 324 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 NANPQ8TBE9 248 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SIGLEC11Q96RL6 698 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 WACQ9BTA9 647 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF416Q9BWM5 594 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 JAM3Q9BX67 310 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 TMPRSS13Q9BYE2 586 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 MMP27Q9H306 513 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 EMC7Q9NPA0 242 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 G6PC2Q9NQR9 355 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 PAK1IP1Q9NWT1 392 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 SCN3BQ9NY72 215 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF224Q9NZL3 707 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 CYB5R1Q9UHQ9 305 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 TPRKBQ9Y3C4 175 aa11.84□□□□□ -0.51
SHKBP1-218ENST00000598907 A0A0G2JMP0 313 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 A0A0X1KG70 313 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 IRGMA1A4Y4 181 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF593O00488 134 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 SEC14L2O76054 403 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 WNT11O96014 354 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 IGHA1P01876 353 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 HLA-DQA2P01906 255 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 ADRA2AP08913 450 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 MMP7P09237 267 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms