RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
TGFB1-202ENST00000597453 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
TGFB1-202ENST00000597453 SLC37A3Q8NCC5 494 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 SLC26A10Q8NG04 563 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 FN3KQ9H479 309 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 SRA1Q9HD15 236 aaKnown RBP12.78□□□□□ -0.36
TGFB1-202ENST00000597453 TMEM106BQ9NUM4 274 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 PLEK2Q9NYT0 353 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 RIIAD1A6NNX1 92 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ATP6V1G2O95670 118 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 IFNGP01579 166 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 DBHP09172 617 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 SBK2P0C263 348 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF3P17036 446 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 GATA3P23771 443 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.37
TGFB1-202ENST00000597453 DBPQ10586 325 aaPredicted RBP12.77□□□□□ -0.37
TGFB1-202ENST00000597453 CRMP1Q14194 572 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 SLC27A4Q6P1M0 643 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ZFP1Q6P2D0 407 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 PARP8Q8N3A8 854 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF283Q8N7M2 679 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 OR2T4Q8NH00 348 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 OR1F12Q8NHA8 337 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ST7LQ8TDW4 575 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 C22orf15Q8WYQ4 148 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 LRTOMTQ8WZ04 291 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 RBM4Q9BWF3 364 aaKnown RBP12.77□□□□□ -0.37
TGFB1-202ENST00000597453 GABARAPL1Q9H0R8 117 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 ESM1Q9NQ30 184 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 PAPOLBQ9NRJ5 636 aaKnown RBP12.77□□□□□ -0.37
TGFB1-202ENST00000597453 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
TGFB1-202ENST00000597453 G3V2T6 193 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 RER1O15258 196 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 TUBG1P23258 451 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 TNFSF4P23510 183 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 POU1F1P28069 291 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 CENPAP49450 140 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 SLC25A1P53007 311 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 ZMYND11Q15326 602 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 AMIGO2Q86SJ2 522 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 OR5AS1Q8N127 324 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 DEFB108BQ8NET1 73 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 FAM216AQ8WUB2 273 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 ITLN1Q8WWA0 313 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 PYDC1Q8WXC3 89 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 HAVCR1Q96D42 359 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 PTTG3PQ9NZH4 202 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 ATPIF1Q9UII2 106 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 POLR1DQ9Y2S0 133 aa12.76□□□□□ -0.37
TGFB1-202ENST00000597453 TMEM89A2RUT3 159 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 FOXH1O75593 365 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 COMPP49747 757 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-202ENST00000597453 DAPP51397 102 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 HIST1H3AP68431 136 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 CDK5Q00535 292 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 HLXQ14774 488 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-202ENST00000597453 MEP1BQ16820 701 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 HIST2H3PS2Q5TEC6 136 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 HIST2H3AQ71DI3 136 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-202ENST00000597453 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 ZDHHC22Q8N966 263 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 PROKR2Q8NFJ6 384 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 OR9Q1Q8NGQ5 310 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 PTP4A1Q93096 173 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 CENPNQ96H22 339 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-202ENST00000597453 OR2V2Q96R30 315 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 SUCNR1Q9BXA5 334 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 PATZ1Q9HBE1 687 aaKnown RBP12.75□□□□□ -0.37
TGFB1-202ENST00000597453 SLC25A19Q9HC21 320 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 IL19Q9UHD0 177 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 KCNG2Q9UJ96 466 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 LHFPL6Q9Y693 200 aa12.75□□□□□ -0.37
TGFB1-202ENST00000597453 PPIAL4EA0A075B759 164 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 PPIAL4CA0A0B4J2A2 164 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 PPIAL4DF5H284 164 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 H3BNX3 289 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 HLA-DQA2P01906 255 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 PPIAL4FP0DN26 164 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms