RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 GNGT2O14610 69 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 DNAJC8O75937 253 aaPredicted RBP8.87□□□□□ -0.99
CCDC9-203ENST00000596938 SOX14O95416 240 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 FSTL3O95633 263 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PNPP00491 289 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 IGHV2-70P01814 119 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 SBK2P0C263 348 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PPIAL4FP0DN26 164 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 GRK5P34947 590 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 SRP9P49458 86 aaKnown RBP8.87□□□□□ -0.99
CCDC9-203ENST00000596938 ENTPD1P49961 510 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 GK2Q14410 553 aaPredicted RBP8.87□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF181Q2M3W8 571 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 LIPNQ5VXI9 398 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 DRAM2Q6UX65 266 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 DCXRQ7Z4W1 244 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PHC2Q8IXK0 858 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 OR5AS1Q8N127 324 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 KLHL36Q8N4N3 616 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 CELF2-AS1Q8N7Q2 184 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF511Q8NB15 262 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 OR51L1Q8NGJ5 315 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 OR9Q1Q8NGQ5 310 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 TEX47Q8TBZ9 253 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 SLCO4A1Q96BD0 722 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF799Q96GE5 643 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 MEGF10Q96KG7 1140 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 SIGLEC11Q96RL6 698 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 DCAF16Q9NXF7 216 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PDP1Q9P0J1 537 aaPredicted RBP8.87□□□□□ -0.99
CCDC9-203ENST00000596938 METRNQ9UJH8 293 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 COMMD3-BMI1R4GMX3 469 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 MALRD1Q5VYJ5 2156 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 A0A0G2JMP0 313 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 A0A0X1KG70 313 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 TCRBV3S1A0A5B6 114 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 ISPDA4D126 451 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 H0YL77 283 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 GSC2O15499 205 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 MLNRO43193 412 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 FOXH1O75593 365 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 GYPBP06028 91 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF3P17036 446 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 RPS27P42677 84 aaKnown RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 GATA4P43694 442 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 SLC6A9P48067 706 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 BTG1P62324 171 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 CDK5Q00535 292 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 SCGB2A2Q13296 93 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 FLOT2Q14254 428 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 LINC01590Q5TEZ4 76 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 LYPD4Q6UWN0 246 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 C1orf229Q6ZS94 237 aaPredicted RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 PGAP1Q75T13 922 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 RHOUQ7L0Q8 258 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM179BQ7Z7N9 219 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 BHLHE23Q8NDY6 225 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 OR4M2Q8NGB6 313 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 ST7LQ8TDW4 575 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 ERGIC1Q969X5 290 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 SLAMF6Q96DU3 332 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 KCNJ15Q99712 375 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 SLC22A4Q9H015 551 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF556Q9HAH1 456 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 PATZ1Q9HBE1 687 aaKnown RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 DNAJB9Q9UBS3 223 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 PCDHB10Q9UN67 800 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 POMPQ9Y244 141 aa8.86□□□□□ -0.99
CCDC9-203ENST00000596938 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 NOP16Q9Y3C1 178 aaKnown RBP8.86□□□□□ -0.99
CCDC9-203ENST00000596938 A0A0A6YYJ9 748 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 CD300LBA8K4G0 201 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 F5H5P2 479 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 H3BN98 237 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 TCF21O43680 179 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 E2F6O75461 281 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 GLCEO94923 617 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 AVPP01185 164 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 HMGN1P05114 100 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 SPARCP09486 303 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 CLUP10909 449 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 PSKH1P11801 424 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 OSMP13725 252 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 ANXA8P13928 327 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 PAICSP22234 425 aaKnown RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 ZFP36P26651 326 aaKnown RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 GSTT1P30711 240 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 MDH2P40926 338 aaKnown RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 SLC15A1P46059 708 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 CBX1P83916 185 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF92Q03936 586 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 BNIP1Q12981 228 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 GINS1Q14691 196 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 ZMYND11Q15326 602 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 TAF13Q15543 124 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 KRTAP24-1Q3LI83 254 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms