RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 LRRC28Q86X40 367 aaPredicted RBP8.8□□□□□ -1
LIG1-213ENST00000596672 BCL6BQ8N143 479 aaPredicted RBP8.8□□□□□ -1
LIG1-213ENST00000596672 PAPD5Q8NDF8 572 aaKnown RBP8.8□□□□□ -1
LIG1-213ENST00000596672 OR52E2Q8NGJ4 325 aa8.8□□□□□ -1
LIG1-213ENST00000596672 OR51L1Q8NGJ5 315 aa8.8□□□□□ -1
LIG1-213ENST00000596672 C22orf15Q8WYQ4 148 aa8.8□□□□□ -1
LIG1-213ENST00000596672 DACT3Q96B18 629 aaPredicted RBP8.8□□□□□ -1
LIG1-213ENST00000596672 OR2V2Q96R30 315 aa8.8□□□□□ -1
LIG1-213ENST00000596672 COQ7Q99807 217 aa8.8□□□□□ -1
LIG1-213ENST00000596672 IFT27Q9BW83 186 aa8.8□□□□□ -1
LIG1-213ENST00000596672 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
LIG1-213ENST00000596672 C1QTNF5Q9BXJ0 243 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TMEM165Q9HC07 324 aa8.8□□□□□ -1
LIG1-213ENST00000596672 GCM1Q9NP62 436 aa8.8□□□□□ -1
LIG1-213ENST00000596672 UBAP1Q9NZ09 502 aa8.8□□□□□ -1
LIG1-213ENST00000596672 METRNQ9UJH8 293 aa8.8□□□□□ -1
LIG1-213ENST00000596672 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
LIG1-213ENST00000596672 C3orf80F5H4A9 247 aa8.79□□□□□ -1
LIG1-213ENST00000596672 F5H5P2 479 aa8.79□□□□□ -1
LIG1-213ENST00000596672 CYB5R3P00387 301 aaPredicted RBP8.79□□□□□ -1
LIG1-213ENST00000596672 MT-ND5P03915 603 aa8.79□□□□□ -1
LIG1-213ENST00000596672 RAP2AP10114 183 aa8.79□□□□□ -1
LIG1-213ENST00000596672 RAC2P15153 192 aa8.79□□□□□ -1
LIG1-213ENST00000596672 EPHA1P21709 976 aa8.79□□□□□ -1
LIG1-213ENST00000596672 FASP25445 335 aa8.79□□□□□ -1
LIG1-213ENST00000596672 SLC6A6P31641 620 aa8.79□□□□□ -1
LIG1-213ENST00000596672 GUCA1AP43080 201 aaPredicted RBP8.79□□□□□ -1
LIG1-213ENST00000596672 SLC6A9P48067 706 aa8.79□□□□□ -1
LIG1-213ENST00000596672 CENPAP49450 140 aa8.79□□□□□ -1
LIG1-213ENST00000596672 ARHGDIAP52565 204 aa8.79□□□□□ -1
LIG1-213ENST00000596672 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.79□□□□□ -1
LIG1-213ENST00000596672 MAB21L1Q13394 359 aa8.79□□□□□ -1
LIG1-213ENST00000596672 GK2Q14410 553 aaPredicted RBP8.79□□□□□ -1
LIG1-213ENST00000596672 SNAI3Q3KNW1 292 aa8.79□□□□□ -1
LIG1-213ENST00000596672 ZDHHC22Q8N966 263 aa8.79□□□□□ -1
LIG1-213ENST00000596672 BHLHE23Q8NDY6 225 aa8.79□□□□□ -1
LIG1-213ENST00000596672 C19orf18Q8NEA5 215 aa8.79□□□□□ -1
LIG1-213ENST00000596672 OR8G5Q8NG78 346 aa8.79□□□□□ -1
LIG1-213ENST00000596672 GNPDA2Q8TDQ7 276 aa8.79□□□□□ -1
LIG1-213ENST00000596672 TAF15Q92804 592 aaKnown RBP eCLIP8.79□□□□□ -1
LIG1-213ENST00000596672 RAB1CQ92928 201 aa8.79□□□□□ -1
LIG1-213ENST00000596672 MEGF10Q96KG7 1140 aa8.79□□□□□ -1
LIG1-213ENST00000596672 C1orf147Q96MC9 270 aaPredicted RBP8.79□□□□□ -1
LIG1-213ENST00000596672 SLC6A7Q99884 636 aa8.79□□□□□ -1
LIG1-213ENST00000596672 GAL3ST1Q99999 423 aa8.79□□□□□ -1
LIG1-213ENST00000596672 SLC30A2Q9BRI3 323 aa8.79□□□□□ -1
LIG1-213ENST00000596672 NMNAT2Q9BZQ4 307 aa8.79□□□□□ -1
LIG1-213ENST00000596672 OCEL1Q9H607 264 aa8.79□□□□□ -1
LIG1-213ENST00000596672 PPP1R3EQ9H7J1 279 aa8.79□□□□□ -1
LIG1-213ENST00000596672 PATZ1Q9HBE1 687 aaKnown RBP8.79□□□□□ -1
LIG1-213ENST00000596672 CYSLTR2Q9NS75 346 aa8.79□□□□□ -1
LIG1-213ENST00000596672 IL20Q9NYY1 176 aa8.79□□□□□ -1
LIG1-213ENST00000596672 ATPIF1Q9UII2 106 aa8.79□□□□□ -1
LIG1-213ENST00000596672 CDH10Q9Y6N8 788 aa8.79□□□□□ -1
LIG1-213ENST00000596672 NOTCH1P46531 2555 aa8.79□□□□□ -1
LIG1-213ENST00000596672 ISPDA4D126 451 aa8.78□□□□□ -1
LIG1-213ENST00000596672 SAC3D1A6NKF1 404 aa8.78□□□□□ -1
LIG1-213ENST00000596672 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
LIG1-213ENST00000596672 CASQ2O14958 399 aaPredicted RBP8.78□□□□□ -1
LIG1-213ENST00000596672 GYPBP06028 91 aa8.78□□□□□ -1
LIG1-213ENST00000596672 WNT2P09544 360 aa8.78□□□□□ -1
LIG1-213ENST00000596672 FCGR1AP12314 374 aa8.78□□□□□ -1
LIG1-213ENST00000596672 GSTM3P21266 225 aa8.78□□□□□ -1
LIG1-213ENST00000596672 PEX2P28328 305 aa8.78□□□□□ -1
LIG1-213ENST00000596672 CRABP1P29762 137 aa8.78□□□□□ -1
LIG1-213ENST00000596672 CD80P33681 288 aa8.78□□□□□ -1
LIG1-213ENST00000596672 LIPAP38571 399 aa8.78□□□□□ -1
LIG1-213ENST00000596672 RAD23AP54725 363 aa8.78□□□□□ -1
LIG1-213ENST00000596672 MPPED2Q15777 294 aa8.78□□□□□ -1
LIG1-213ENST00000596672 LINC01590Q5TEZ4 76 aa8.78□□□□□ -1
LIG1-213ENST00000596672 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
LIG1-213ENST00000596672 C1orf174Q8IYL3 243 aa8.78□□□□□ -1
LIG1-213ENST00000596672 ZNF511Q8NB15 262 aa8.78□□□□□ -1
LIG1-213ENST00000596672 SLC37A3Q8NCC5 494 aa8.78□□□□□ -1
LIG1-213ENST00000596672 GJC3Q8NFK1 279 aa8.78□□□□□ -1
LIG1-213ENST00000596672 OR9Q1Q8NGQ5 310 aa8.78□□□□□ -1
LIG1-213ENST00000596672 ZNF48Q96MX3 618 aaPredicted RBP8.78□□□□□ -1
LIG1-213ENST00000596672 AMELYQ99218 206 aa8.78□□□□□ -1
LIG1-213ENST00000596672 RBM4Q9BWF3 364 aaKnown RBP8.78□□□□□ -1
LIG1-213ENST00000596672 EGLN1Q9GZT9 426 aa8.78□□□□□ -1
LIG1-213ENST00000596672 HDHD2Q9H0R4 259 aa8.78□□□□□ -1
LIG1-213ENST00000596672 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
LIG1-213ENST00000596672 CGGBP1Q9UFW8 167 aaPredicted RBP8.78□□□□□ -1
LIG1-213ENST00000596672 IL19Q9UHD0 177 aa8.78□□□□□ -1
LIG1-213ENST00000596672 POLR3KQ9Y2Y1 108 aaPredicted RBP8.78□□□□□ -1
LIG1-213ENST00000596672 CEACAM18A8MTB9 384 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 F5H5K5 113 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 TNFRSF11BO00300 401 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 IDH3BO43837 385 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 SOX14O95416 240 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ZNF12P17014 697 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 OTX1P32242 354 aaPredicted RBP8.77□□□□□ -1.01
LIG1-213ENST00000596672 SMIM11AP58511 58 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 HILS1P60008 231 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 BTG1P62324 171 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ZNF92Q03936 586 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 CRMP1Q14194 572 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 ATP6AP1Q15904 470 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 PCK2Q16822 640 aa8.77□□□□□ -1.01
LIG1-213ENST00000596672 OGFRL1Q5TC84 451 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms