RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MEPCEQ7L2J0 689 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 GID4Q8IVV7 300 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 SAP30LQ9HAJ7 183 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 LAMP5Q9UJQ1 280 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 TMEM14AQ9Y6G1 99 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 FLNAP21333 2647 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 IGHV1-46P01743 117 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 HEXAP06865 529 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 PSKH1P11801 424 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 COL8A2P25067 703 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 NAA10P41227 235 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 CRYBB2P43320 205 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 CDK5R2Q13319 367 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 GGTLC2Q14390 218 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 HLXQ14774 488 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 ZSCAN26Q16670 478 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 OR2T2Q6IF00 324 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 KCTD18Q6PI47 426 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 ZBTB49Q6ZSB9 765 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 PGAP1Q75T13 922 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 SPATC1Q76KD6 591 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 MRPL21Q7Z2W9 205 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 NAA40Q86UY6 237 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 CBR4Q8N4T8 237 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 OR8G5Q8NG78 346 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 OR8J1Q8NGP2 316 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 TRUB1Q8WWH5 349 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 ELMOD3Q96FG2 381 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 IL4I1Q96RQ9 567 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 SMR3AQ99954 134 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 OPA3Q9H6K4 179 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 NIPAL2Q9H841 368 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 MSL2Q9HCI7 577 aa14.72□□□□□ -0.05
SHKBP1-212ENST00000596163 IGHV1-69-2A0A0G2JMI3 117 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 ZSCAN5BA6NJL1 495 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 XRCC2O43543 280 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 CD55P08174 381 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 POLR2IP36954 125 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 GPR6P46095 362 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 CX3CR1P49238 355 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 TNFAIP6P98066 277 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 RIN1Q13671 783 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 HFEQ30201 348 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 AADACL4Q5VUY2 407 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 MAPK1IP1LQ8NDC0 245 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 OR13G1Q8NGZ3 307 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 ASB17Q8WXJ9 295 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 GTF3AQ92664 365 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 EME1Q96AY2 570 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 CNN2Q99439 309 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 MNTQ99583 582 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 BPESC1Q9GZL8 116 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 IMPAD1Q9NX62 359 aa14.71□□□□□ -0.05
SHKBP1-212ENST00000596163 ACANP16112 2415 aa14.71□□□□□ -0.06
SHKBP1-212ENST00000596163 CCDC182A6NF36 153 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 IQCF6A8MYZ5 107 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 LYNX1G3V0Z9 82 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 NCR1O76036 304 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 ANXA2P07355 339 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 LYNX1P0DP58 116 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 TNFRSF1AP19438 455 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 ALOX5APP20292 161 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 OPRL1P41146 370 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 CHN2P52757 468 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC3A1Q07837 685 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 TMED1Q13445 227 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 TMEM255AQ5JRV8 349 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 DEGS2Q6QHC5 323 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 USP51Q70EK9 711 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 KRT77Q7Z794 578 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 OR5AS1Q8N127 324 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 OR2Z1Q8NG97 314 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 OR52H1Q8NGJ2 320 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 SPRYD4Q8WW59 207 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 RFKQ969G6 155 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 TMEM100Q9NV29 134 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 HAO2Q9NYQ3 351 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 WARS2Q9UGM6 360 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 NOP16Q9Y3C1 178 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 N6AMT1Q9Y5N5 214 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 VPS13CQ709C8 3753 aa14.7□□□□□ -0.06
SHKBP1-212ENST00000596163 A0A096LNT2 108 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 GGT3PA6NGU5 568 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 PHYHO14832 338 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 TBX1O43435 398 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 PPIHO43447 177 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 CDC14BO60729 498 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 CFL1P23528 166 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 TMEM249Q2WGJ8 235 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 YIPF5Q969M3 257 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 HRASLS5Q96KN8 279 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 REPIN1Q9BWE0 567 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 MROQ9BYG7 248 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC22A4Q9H015 551 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF275Q9NSD4 429 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 IL19Q9UHD0 177 aa14.69□□□□□ -0.06
SHKBP1-212ENST00000596163 M0R129 80 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF254O75437 659 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 MRPL3P09001 348 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms