RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GID4Q8IVV7 300 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF283Q8N7M2 679 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 OR2AE1Q8NHA4 323 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 NEU4Q8WWR8 484 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 FAM168AQ92567 244 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF582Q96NG8 517 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 CNN2Q99439 309 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 SMR3AQ99954 134 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 IMPAD1Q9NX62 359 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 FBXO9Q9UK97 447 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC22A31A6NKX4 558 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 ERCC1P07992 297 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 KITLGP21583 273 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 HSD11B1P28845 292 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 RBMXP38159 391 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 PDLIM4P50479 330 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF81P51508 661 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF121P58317 390 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GRB2P62993 217 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 CCL8P80075 99 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GK2Q14410 553 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GLYATL3Q5SZD4 288 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 FBXW12Q6X9E4 464 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 BHLHE23Q8NDY6 225 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 OR51G2Q8NGK0 314 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 OR5L1Q8NGL2 311 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 OR8J1Q8NGP2 316 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 UBASH3BQ8TF42 649 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 YIPF5Q969M3 257 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 HAVCR1Q96D42 359 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 COX4I2Q96KJ9 171 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 RHNO1Q9BSD3 238 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 YIPF3Q9GZM5 350 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GSX1Q9H4S2 264 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 BRD7Q9NPI1 651 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 FAM118AQ9NWS6 357 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GPR160Q9UJ42 338 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 LAMP5Q9UJQ1 280 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 GMPPBQ9Y5P6 360 aa11.74□□□□□ -0.53
SHKBP1-207ENST00000595631 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 J3QW42 95 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 MAGEB4O15481 346 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 RAC2P15153 192 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 COL8A2P25067 703 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC15A1P46059 708 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF92Q03936 586 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 USP51Q70EK9 711 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 FAM57BQ71RH2 274 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 PRSS45Q7RTY3 260 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 COG8Q96MW5 612 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 TBX5Q99593 518 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 SMPD3Q9NY59 655 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF319Q9P2F9 582 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 LRP12Q9Y561 859 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 CACNG2Q9Y698 323 aa11.73□□□□□ -0.53
SHKBP1-207ENST00000595631 A0A096LNT2 108 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 LOC100130705A0A1B0GUX0 176 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 TBX1O43435 398 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 CDC14BO60729 498 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 ENTPD6O75354 484 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 MT-ND5P03915 603 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 INHBBP09529 407 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 SBK2P0C263 348 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 TUBG1P23258 451 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 HTR1FP30939 366 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 MALLQ13021 153 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 MOGQ16653 247 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 SSX6Q7RTT6 188 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 KRT77Q7Z794 578 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 ENTHD1Q8IYW4 607 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 OR2Z1Q8NG97 314 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 HAO2Q9NYQ3 351 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 TREM2Q9NZC2 230 aa11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 WARS2Q9UGM6 360 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-207ENST00000595631 LOC390937A0A1W2PQ73 354 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 VWC2LB2RUY7 222 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 H0YL77 283 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 CLIC3O95833 236 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 CSF3P09919 207 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 GABRB1P18505 474 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 DSCR9P59020 149 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 CXCR4P61073 352 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 CDK5R2Q13319 367 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms