RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PHF3Q92576 2039 aaKnown RBP11.8□□□□□ -0.52
VRK3-209ENST00000594948 TCRBV21S2A2A0A5A6 115 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 PQLC2LA1A4F0 135 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 C5orf51A6NDU8 294 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 EEF1E1-BLOC1S5C9J1V9 151 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 SSX5O60225 188 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 LMX1BO60663 402 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 MPZL1O95297 269 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 VAMP1P23763 118 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NR0B1P51843 470 aaKnown RBP11.8□□□□□ -0.52
VRK3-209ENST00000594948 ZP2Q05996 745 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 PJVKQ0ZLH3 352 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 TMEM31Q5JXX7 168 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NKAPLQ5M9Q1 402 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NSUN5P2Q63ZY6 315 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 PRSS54Q6PEW0 395 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 C9orf40Q8IXQ3 194 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 GVQW1Q8N7I0 195 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 MFSD8Q8NHS3 518 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NUDCD2Q8WVJ2 157 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 DAZLQ92904 295 aaKnown RBP11.8□□□□□ -0.52
VRK3-209ENST00000594948 TSLPQ969D9 159 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NKD1Q969G9 470 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 FGGYQ96C11 551 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 RNF126Q9BV68 326 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 LRRC61Q9BV99 259 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 MOB1AQ9H8S9 216 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 ADAMTS9Q9P2N4 1935 aa11.8□□□□□ -0.52
VRK3-209ENST00000594948 NPIPA5E9PKD4 350 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 MS4A18H0YCH9 400 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 SMAD9O15198 467 aaKnown RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 SFT2D2O95562 160 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 TTRP02766 147 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 AKR1C4P17516 323 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 RFC3P40938 356 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 AIMP2Q13155 320 aaKnown RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 MS4A18Q3C1V0 323 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 KLHL24Q6TFL4 600 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 UNQ6126/PRO20091Q6UXV3 157 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 SLC29A4Q7RTT9 530 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 OR52N4Q8NGI2 321 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 OR5D14Q8NGL3 314 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 OR4K15Q8NH41 348 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 CASTOR1Q8WTX7 329 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 AQP10Q96PS8 301 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 RAB33BQ9H082 229 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 FN3KRPQ9HA64 309 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 FANCFQ9NPI8 374 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 CUTCQ9NTM9 273 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 SOHLH2Q9NX45 425 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 MYEF2Q9P2K5 600 aaKnown RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 KLHL13Q9P2N7 655 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 DNAJB11Q9UBS4 358 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 MMP17Q9ULZ9 603 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 GPR132Q9UNW8 380 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 ZNF98A6NK75 572 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 F8W036 122 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 SOX1O00570 391 aaPredicted RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 ACTL6AO96019 429 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 CBX5P45973 191 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 BLOC1S1P78537 153 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 S100A12P80511 92 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 EIF3IQ13347 325 aaKnown RBP11.79□□□□□ -0.52
VRK3-209ENST00000594948 NAA40Q86UY6 237 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 MARCH1Q8TCQ1 289 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 PAQR8Q8TEZ7 354 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 CMBLQ96DG6 245 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 KLHDC7BQ96G42 594 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 COPS7AQ9UBW8 275 aa11.79□□□□□ -0.52
VRK3-209ENST00000594948 H3BMH7 237 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 LINC01565O15544 149 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 SYT7O43581 403 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 GMFGO60234 142 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 WISP1O95388 367 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 RAB13P51153 203 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 ARHGDIBP52566 201 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 SUMO3P55854 103 aaPredicted RBP11.78□□□□□ -0.52
VRK3-209ENST00000594948 CLDN6P56747 220 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 MST1LQ2TV78 715 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 H1FNTQ75WM6 255 aaPredicted RBP11.78□□□□□ -0.52
VRK3-209ENST00000594948 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
VRK3-209ENST00000594948 LINC00346Q8IVM7 164 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 ZSCAN4Q8NAM6 433 aaPredicted RBP11.78□□□□□ -0.52
VRK3-209ENST00000594948 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 NUBPLQ8TB37 319 aa11.78□□□□□ -0.52
VRK3-209ENST00000594948 SLAMF6Q96DU3 332 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms