RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SRD5A2P31213 254 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 CX3CR1P49238 355 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 ACTBP60709 375 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 GRB2P62993 217 aaKnown RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 ACTG1P63261 375 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 ENDOGQ14249 297 aaKnown RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 B3GNTL1Q67FW5 361 aaPredicted RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 ZNF627Q7L945 461 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 NLRC3Q7RTR2 1065 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SLC36A1Q7Z2H8 476 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SLC22A24Q8N4F4 322 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 ZIC4Q8N9L1 334 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 NABP1Q96AH0 204 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 GAL3ST1Q99999 423 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 ZPBPQ9BS86 351 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SOX7Q9BT81 388 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 STRADBQ9C0K7 418 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 MYEF2Q9P2K5 600 aaKnown RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 SCP2D1Q9UJQ7 156 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 FOXD3Q9UJU5 478 aaPredicted RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 RAB22AQ9UL26 194 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 LNP1A1A4G5 178 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SNRPGP15A8MWD9 76 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 NPIPA2E9PIF3 369 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 NPIPA3F8WFD2 350 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 TNFSF11O14788 317 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 BPNT1O95861 308 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 CD3DP04234 171 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 RAB3AP20336 220 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 MSR1P21757 451 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 CTSSP25774 331 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 UNC119Q13432 240 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 SSPNQ14714 243 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 STEAP1BQ6NZ63 245 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 RAB11FIP2Q7L804 512 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 GABRG1Q8N1C3 465 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 BEST3Q8N1M1 668 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 PAQR4Q8N4S7 273 aaPredicted RBP13.91□□□□□ -0.18
MBD1-227ENST00000592060 SPICQ8N5J4 248 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 TMEM229BQ8NBD8 167 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 OR5D14Q8NGL3 314 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 OR13C9Q8NGT0 318 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 TAAR9Q96RI9 348 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 GINS4Q9BRT9 223 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 DDA1Q9BW61 102 aa13.91□□□□□ -0.18
MBD1-227ENST00000592060 NCOA6Q14686 2063 aaPredicted RBP13.9□□□□□ -0.18
MBD1-227ENST00000592060 SDK2Q58EX2 2172 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 LRRC3CA6NJW4 275 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 TNFRSF10AO00220 468 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 DNPH1O43598 174 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 WDPCPO95876 746 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 P04436 131 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 SGCAQ16586 387 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 ABHD12BQ7Z5M8 362 aaPredicted RBP13.9□□□□□ -0.18
MBD1-227ENST00000592060 OR5AS1Q8N127 324 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 OR51S1Q8NGJ8 323 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 NELFAQ9H3P2 528 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 GPN1Q9HCN4 374 aaPredicted RBP13.9□□□□□ -0.18
MBD1-227ENST00000592060 GPR84Q9NQS5 396 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 FBLN5Q9UBX5 448 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 FARSAQ9Y285 508 aaKnown RBP13.9□□□□□ -0.18
MBD1-227ENST00000592060 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
MBD1-227ENST00000592060 GJE1A6NN92 205 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 SMAD9O15198 467 aaKnown RBP13.89□□□□□ -0.19
MBD1-227ENST00000592060 CREBL2O60519 120 aaPredicted RBP13.89□□□□□ -0.19
MBD1-227ENST00000592060 ZNF20P17024 532 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 TAS2R19P59542 299 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 HIST1H3AP68431 136 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 GALK2Q01415 458 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 HIST2H3PS2Q5TEC6 136 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 HIST2H3AQ71DI3 136 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ESX1Q8N693 406 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 AQP3Q92482 292 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 DVL3Q92997 716 aaPredicted RBP13.89□□□□□ -0.19
MBD1-227ENST00000592060 SLCO5A1Q9H2Y9 848 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 KLK13Q9UKR3 277 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
MBD1-227ENST00000592060 SLC5A6Q9Y289 635 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 C9orf172C9J069 976 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 RAB27BO00194 218 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 DHHO43323 396 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 IGLV3-1P01715 115 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 SERPINA7P05543 415 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 VSIG8P0DPA2 414 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ABOP16442 354 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ENPP1P22413 925 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 DNASE1P24855 282 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ZNF260Q3ZCT1 412 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ACER2Q5QJU3 275 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 FAM57BQ71RH2 274 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 RNF144BQ7Z419 303 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 YRDCQ86U90 279 aaKnown RBP13.89□□□□□ -0.19
MBD1-227ENST00000592060 GGNQ86UU5 652 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 CDH26Q8IXH8 852 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ZNF283Q8N7M2 679 aa13.89□□□□□ -0.19
MBD1-227ENST00000592060 ACBD4Q8NC06 268 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms