RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ERMAPQ96PL5 475 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-219ENST00000589349 SEPHS2Q99611 448 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 IFT27Q9BW83 186 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 OR2H1Q9GZK4 316 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 TINAGL1Q9GZM7 467 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-219ENST00000589349 SMURF2Q9HAU4 748 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 ELOVL3Q9HB03 270 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 MAN2C1Q9NTJ4 1040 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 DCAF13Q9NV06 445 aaKnown RBP7.02□□□□□ -1.29
DNMT1-219ENST00000589349 ARL8BQ9NVJ2 186 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 NDE1Q9NXR1 346 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 NDUFAF4Q9P032 175 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 LPAR3Q9UBY5 353 aa7.02□□□□□ -1.29
DNMT1-219ENST00000589349 ABCA1O95477 2261 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 TRBV4-1A0A0J9YWV2 114 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PRSS37A4D1T9 235 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 C17orf100A8MU93 164 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 MGRN1O60291 552 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 KHDRBS3O75525 346 aaKnown RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PPP1R3DO95685 299 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 RENP00797 406 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 IGF2P01344 180 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FABP3P05413 133 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 IGFBP1P08833 259 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 CST2P09228 141 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FAM157CP0CG43 387 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 GSTM3P21266 225 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 MNAT1P51948 309 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PPP1CBP62140 327 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 COL10A1Q03692 680 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SCRN3Q0VDG4 424 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FOXI1Q12951 378 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 HFEQ30201 348 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PCGF3Q3KNV8 242 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FAM120AOSQ5T036 256 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FAM27BQ5VT28 67 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 GPR139Q6DWJ6 353 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 DNM1P34Q6PK57 102 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SLC25A47Q6Q0C1 308 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 TMPRSS11FQ6ZWK6 438 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PEG10Q86TG7 708 aaKnown RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PGAM4Q8N0Y7 254 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FAM86B1Q8N7N1 296 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SLC25A40Q8TBP6 338 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SLC7A13Q8TCU3 470 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 CCL17Q92583 94 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 GTF3AQ92664 365 aaKnown RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 TIMD4Q96H15 378 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 C4orf45Q96LM5 186 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 ZNF75AQ96N20 296 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 ZNF416Q9BWM5 594 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 OR2J1Q9GZK6 312 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 EGLN1Q9GZT9 426 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 MYLK2Q9H1R3 596 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SYT4Q9H2B2 425 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 ANKRD19PQ9H560 264 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 SAP30LQ9HAJ7 183 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 POLE4Q9NR33 117 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 ZNF275Q9NSD4 429 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 PLEK2Q9NYT0 353 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 UBAP1Q9NZ09 502 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 VSX1Q9NZR4 365 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 UGT2A1Q9Y4X1 527 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
DNMT1-219ENST00000589349 FN1P02751 2386 aaKnown RBP7.01□□□□□ -1.29
DNMT1-219ENST00000589349 LOC100509620A0A075B734 347 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 IGHV1-69-2A0A0G2JMI3 117 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 A0A1W2PRQ8 180 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 VWC2LB2RUY7 222 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 ARPC2O15144 300 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 SGCEO43556 437 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 MPZL1O95297 269 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 SNAP29O95721 258 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 IGHMP01871 453 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 MMP7P09237 267 aaPredicted RBP7□□□□□ -1.29
DNMT1-219ENST00000589349 ACHEP22303 614 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 TNFSF4P23510 183 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 RRM2P31350 389 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 SLC6A6P31641 620 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 IL2RGP31785 369 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 MPV17P39210 176 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 TMEM33P57088 247 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 DGCR6Q14129 220 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 SEC23BQ15437 767 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 CLEC12AQ5QGZ9 265 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 ELFN2Q5R3F8 820 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 C8orf82Q6P1X6 216 aaPredicted RBP7□□□□□ -1.29
DNMT1-219ENST00000589349 FAHD2BQ6P2I3 314 aaPredicted RBP7□□□□□ -1.29
DNMT1-219ENST00000589349 LEG1Q6P5S2 330 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 DPY19L2P2Q6ZN68 376 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 GLCCI1Q86VQ1 547 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 ZDHHC21Q8IVQ6 265 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 ZNF101Q8IZC7 436 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 ATG16L2Q8NAA4 619 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 LRRC75AQ8NAA5 344 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 OR2AJ1Q8NGZ0 328 aa7□□□□□ -1.29
DNMT1-219ENST00000589349 OR4K13Q8NH42 304 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms