RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PRRT1Q99946 306 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 WDR54Q9H977 334 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 APMAPQ9HDC9 416 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 MED29Q9NX70 200 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 CYB5R1Q9UHQ9 305 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 PLEKHA6Q9Y2H5 1048 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SPTBN5Q9NRC6 3674 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PCDH15Q96QU1 1955 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 A0A087WZY1 265 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 IGHV5-10-1A0A0J9YXX1 117 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 A0A1B0GW55 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 A0A1W2PPL8 197 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PLSCR5A0PG75 271 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM82A0PJX8 343 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OR2J2O76002 312 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L2P0CJ85 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L3P0CJ86 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L4P0CJ87 422 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L5P0CJ88 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L6P0CJ89 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4L7P0CJ90 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 TBPP20226 339 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 AGTR1P30556 359 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SEC61A1P61619 476 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 CCL7P80098 99 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 FMODQ06828 376 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PMPCAQ10713 525 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 EXOSC2Q13868 293 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PLPPR5Q32ZL2 321 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 LPCAT3Q6P1A2 487 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 TSSK4Q6SA08 328 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 C3P1Q6ZMU1 363 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 C16orf47Q6ZP98 133 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 IDO2Q6ZQW0 420 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 GPAT4Q86UL3 456 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SLC38A9Q8NBW4 561 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OR2AK2Q8NG84 335 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OR6X1Q8NH79 312 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 RNF138Q8WVD3 245 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 C11orf40Q8WZ69 217 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 ZBTB8AQ96BR9 441 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SPACA9Q96E40 222 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 ELMOD3Q96FG2 381 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OXGR1Q96P68 337 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OR5B2Q96R09 309 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 MRPL13Q9BYD1 178 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 HEXA-AS1Q9H8Q6 139 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 MYOZ1Q9NP98 299 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUX4Q9UBX2 424 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 MRPS18BQ9Y676 258 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 UNC13CQ8NB66 2214 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 LOC102725191A0A1B0GVB3 256 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM200CA6NKL6 621 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 P2RY10O00398 339 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 RP2O75695 350 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 KDM4BO94953 1096 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 AMY2AP04746 511 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 ITGB2P05107 769 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 CHRM2P08172 466 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 FOSL2P15408 326 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 S100A11P31949 105 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 DUSP3P51452 185 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 AP2S1P53680 142 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SLC35A1P78382 337 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 EXT1Q16394 746 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 RNASE10Q5GAN6 216 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PHF19Q5T6S3 580 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 GUSBP11Q6P575 273 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OPN5Q6U736 354 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF813Q6ZN06 617 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 MDGA2Q7Z553 956 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 COMMD2Q86X83 199 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 UBALD2Q8IYN6 164 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OR1M1Q8NGA1 313 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 C17orf50Q8WW18 174 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SFXN2Q96NB2 322 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 NUDT16L1Q9BRJ7 211 aaKnown RBP6.58□□□□□ -1.36
ZNF540-206ENST00000589117 PBOV1Q9GZY1 135 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 FAM206AQ9NX38 181 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 GLTPQ9NZD2 209 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 KIF25Q9UIL4 384 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SLC5A6Q9Y289 635 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 SESN1Q9Y6P5 492 aa6.58□□□□□ -1.36
ZNF540-206ENST00000589117 TEX51A0A1B0GUA7 166 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 OR2M5A3KFT3 312 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 MEIS3P1A6NDR6 274 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 C9J4A7 227 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 MCRIP1C9JLW8 97 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 H3BUI4 141 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 GOSR2O14653 212 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 ADAM10O14672 748 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 IFNA6P05013 189 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 ACSM4P0C7M7 580 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 IL11P20809 199 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 HOXA6P31267 233 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 GRB2P62993 217 aaKnown RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 PLA2G7Q13093 441 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms