RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 SSMEM1Q8WWF3 244 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
VMP1-209ENST00000588915 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 HOPXQ9BPY8 73 aaPredicted RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 CDADC1Q9BWV3 514 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 CHIAQ9BZP6 476 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 VIPAS39Q9H9C1 493 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 KRCC1Q9NPI7 259 aaPredicted RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 PDP1Q9P0J1 537 aaPredicted RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 B9D1Q9UPM9 204 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 IER3IP1Q9Y5U9 82 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 C22orf46C9J442 243 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 SOCS2O14508 198 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 GSTA4O15217 222 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 HLA-DPB1P04440 258 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 H1F0P07305 194 aaKnown RBP11.62□□□□□ -0.55
VMP1-209ENST00000588915 MELTFP08582 738 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 ACSM4P0C7M7 580 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 MMP9P14780 707 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 RHCEP18577 417 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 CFHR2P36980 270 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 MDH1P40925 334 aaKnown RBP11.62□□□□□ -0.55
VMP1-209ENST00000588915 OMPP47874 163 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 RELBQ01201 579 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 LIPEQ05469 1076 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 CLEC12AQ5QGZ9 265 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 PGAP1Q75T13 922 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 PNLDC1Q8NA58 520 aaKnown RBP11.62□□□□□ -0.55
VMP1-209ENST00000588915 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 RP9Q8TA86 221 aaKnown RBP11.62□□□□□ -0.55
VMP1-209ENST00000588915 GATAD2BQ8WXI9 593 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 DYRK2Q92630 601 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 HSH2DQ96JZ2 352 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 CCT8L2Q96SF2 557 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 FN3KRPQ9HA64 309 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 RNF7Q9UBF6 113 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 RPS6KA6Q9UK32 745 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 FAM32AQ9Y421 112 aaKnown RBP11.62□□□□□ -0.55
VMP1-209ENST00000588915 CAPN7Q9Y6W3 813 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 WNK1Q9H4A3 2382 aa11.62□□□□□ -0.55
VMP1-209ENST00000588915 IGLV1-36A0A0B4J1U3 117 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 F5H5K5 113 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 LGALS8O00214 317 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 ARPC3O15145 178 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 GMDSO60547 372 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 FAM20BO75063 409 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 TOX4O94842 621 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 SERPINA1P01009 418 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 CENPAP49450 140 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 FXYD6P3P58550 94 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 SMARCD3Q6STE5 483 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 HDXQ7Z353 690 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 TSEN54Q7Z6J9 526 aaKnown RBP11.61□□□□□ -0.55
VMP1-209ENST00000588915 ZBTB46Q86UZ6 589 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 SPERTQ8NA61 448 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 SLC26A10Q8NG04 563 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 SPRYD4Q8WW59 207 aaPredicted RBP11.61□□□□□ -0.55
VMP1-209ENST00000588915 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
VMP1-209ENST00000588915 DMRTB1Q96MA1 342 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 TSSK2Q96PF2 358 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 ATF6BQ99941 703 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 PCGF1Q9BSM1 259 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 WDR76Q9H967 626 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 MARCH7Q9H992 704 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 ACOXLQ9NUZ1 547 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 KCNG2Q9UJ96 466 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 AURKCQ9UQB9 309 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
VMP1-209ENST00000588915 TRAV38-1A0A0B4J264 116 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 UNC119BA6NIH7 251 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 DCTN6O00399 190 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 CLPXO76031 633 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 ECDO95905 644 aaPredicted RBP11.6□□□□□ -0.55
VMP1-209ENST00000588915 RENP00797 406 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 LCATP04180 440 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 TPTEP56180 551 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 SRSF4Q08170 494 aaKnown RBP11.6□□□□□ -0.55
VMP1-209ENST00000588915 MEP1BQ16820 701 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 RFX4Q33E94 735 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 METTL11BQ5VVY1 283 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 CORO6Q6QEF8 472 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 RHOUQ7L0Q8 258 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 OR6V1Q8N148 313 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 SLCO4A1Q96BD0 722 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 RCN3Q96D15 328 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 TECTBQ96PL2 329 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 TBX15Q96SF7 602 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 PITX2Q99697 317 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
VMP1-209ENST00000588915 NDUFAF4Q9P032 175 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms