RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 AGAP6Q5VW22 663 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 PLEKHG7Q6ZR37 379 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 SYNPRQ8TBG9 265 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 KLF14Q8TD94 323 aaPredicted RBP16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 CNBD2Q96M20 576 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 BRD7Q9NPI1 651 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 CBLN4Q9NTU7 201 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 MYEF2Q9P2K5 600 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 DUSP13Q9UII6 198 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 N6AMT1Q9Y5N5 214 aa16.29■□□□□ 0.2
CLPTM1-209ENST00000588855 TMEM129A0AVI4 362 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 DAPL1A0PJW8 107 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 CYSRT1A8MQ03 144 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 VSTM5A8MXK1 200 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 FAM20BO75063 409 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ZNF254O75437 659 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 APOC1P02654 83 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ANXA2P07355 339 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ADRA2AP08913 450 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 RIDAP52758 137 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 EFNB3Q15768 340 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ZNF718Q3SXZ3 478 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 TMEM255AQ5JRV8 349 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ZNF684Q5T5D7 378 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 PRSS45Q7RTY3 260 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 C1orf174Q8IYL3 243 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 ACBD7Q8N6N7 88 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 BPIFB6Q8NFQ5 453 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 NIPAL2Q9H841 368 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 FGF20Q9NP95 211 aaPredicted RBP16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 PCDHGB5Q9Y5G0 923 aa16.28■□□□□ 0.2
CLPTM1-209ENST00000588855 B9A039 149 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 KRT8P05787 483 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 GCH1P30793 250 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 KLF3P57682 345 aaPredicted RBP16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 HLXQ14774 488 aaPredicted RBP16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 SWI5Q1ZZU3 235 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 C6orf141Q5SZD1 244 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 FAM57BQ71RH2 274 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 CDH24Q86UP0 819 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 OR5L1Q8NGL2 311 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 SNX33Q8WV41 574 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 GGHQ92820 318 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 COG8Q96MW5 612 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 PLCXD1Q9NUJ7 323 aa16.27■□□□□ 0.2
CLPTM1-209ENST00000588855 IGLV3-9A0A075B6K5 115 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 H3BSA7 217 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 SLC1A7O00341 560 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 TBX1O43435 398 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 CDKN1AP38936 164 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 MFGE8Q08431 387 aaPredicted RBP16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 CDONQ4KMG0 1287 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 TP53I3Q53FA7 332 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 MBNL2Q5VZF2 373 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 LHFPL3Q86UP9 236 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 YIPF7Q8N8F6 280 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 OR2AE1Q8NHA4 323 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF649Q9BS31 505 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 FAM206AQ9NX38 181 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 PSORS1C1Q9UIG5 152 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 USF3Q68DE3 2245 aa16.26■□□□□ 0.19
CLPTM1-209ENST00000588855 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 A0A1W2PPW3 197 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 IRGMA1A4Y4 181 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 METTL15A6NJ78 407 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 SRSF10O75494 262 aaKnown RBP16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 TUBG1P23258 451 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 DNASE1P24855 282 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 DCTDP32321 178 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 PRSS12P56730 875 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 SNRPD2P62316 118 aaKnown RBP16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 GLYATL3Q5SZD4 288 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 AHSA2Q719I0 299 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 CMBLQ96DG6 245 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 PGAM5Q96HS1 289 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 ALG8Q9BVK2 526 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 CACNG6Q9BXT2 260 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 TUBG2Q9NRH3 451 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 INPP5EQ9NRR6 644 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 ACOXLQ9NUZ1 547 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 ERVK13-1Q9NX77 482 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 CNOT2Q9NZN8 540 aaKnown RBP16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF319Q9P2F9 582 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 GNG8Q9UK08 70 aa16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 DIMT1Q9UNQ2 313 aaKnown RBP16.25■□□□□ 0.19
CLPTM1-209ENST00000588855 EFCAB10A6NFE3 127 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 SULT1C4O75897 302 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 RPP14O95059 124 aaKnown RBP16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 PNPP00491 289 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 IGHV3-13P01766 116 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 PIPP12273 146 aaPredicted RBP16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 EVX1P49640 407 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 MVKQ03426 396 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 MALLQ13021 153 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 PSG7Q13046 419 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 GALEQ14376 348 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 GK2Q14410 553 aaPredicted RBP16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF829Q3KNS6 432 aaPredicted RBP16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ALKBH6Q3KRA9 238 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms