RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PRAMEF6Q5VXH4 476 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
CCDC43-204ENST00000588687 GJC3Q8NFK1 279 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 SLC26A10Q8NG04 563 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 RCN3Q96D15 328 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 RSRC1Q96IZ7 334 aaKnown RBP15.28■□□□□ 0.04
CCDC43-204ENST00000588687 FUZQ9BT04 418 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 SMURF1Q9HCE7 757 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 TMEM100Q9NV29 134 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 TMCC3Q9ULS5 477 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 IER3IP1Q9Y5U9 82 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 ENPP4Q9Y6X5 453 aa15.28■□□□□ 0.04
CCDC43-204ENST00000588687 CXCR6O00574 342 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 LIPEQ05469 1076 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 SEC23BQ15437 767 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 PGM2L1Q6PCE3 622 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 C17orf107Q6ZR85 190 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 ZDHHC16Q969W1 377 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 ERGIC1Q969X5 290 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 NDEL1Q9GZM8 345 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 TNFRSF19Q9NS68 423 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 POLR1DQ9Y2S0 133 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 POMT1Q9Y6A1 747 aa15.27■□□□□ 0.04
CCDC43-204ENST00000588687 TRBV4-1A0A0J9YWV2 114 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 CENPVL3A0A0U1RRI6 287 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 CLPSL1A2RUU4 121 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 ZNF879B4DU55 563 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 SERPINA1P01009 418 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 BRICD5Q6PL45 260 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 DPY19L2P2Q6ZN68 376 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 ARPINQ7Z6K5 226 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-204ENST00000588687 OR6V1Q8N148 313 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 PCGF1Q9BSM1 259 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 HCAR1Q9BXC0 346 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 SIRPDQ9H106 197 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 MMP27Q9H306 513 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 NDUFAF4Q9P032 175 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 RPS6KA6Q9UK32 745 aa15.26■□□□□ 0.03
CCDC43-204ENST00000588687 P2RY10O00398 339 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 NPY4RP50391 375 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 RPL15P61313 204 aaKnown RBP15.25■□□□□ 0.03
CCDC43-204ENST00000588687 ASPHD2Q6ICH7 369 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 NAA40Q86UY6 237 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 LINC00346Q8IVM7 164 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 FAM71F1Q96KD3 344 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-204ENST00000588687 UFSP2Q9NUQ7 469 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 FGFR1OP2Q9NVK5 253 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 B9D1Q9UPM9 204 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 AP3M1Q9Y2T2 418 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 CAPN7Q9Y6W3 813 aa15.25■□□□□ 0.03
CCDC43-204ENST00000588687 H1F0P07305 194 aaKnown RBP15.24■□□□□ 0.03
CCDC43-204ENST00000588687 CRABP1P29762 137 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 GGT2P36268 569 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 MDH1P40925 334 aaKnown RBP15.24■□□□□ 0.03
CCDC43-204ENST00000588687 GSK3BP49841 420 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 SLC7A2P52569 658 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 PROK1P58294 105 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 SF3A3Q12874 501 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCDC43-204ENST00000588687 TRAP1Q12931 704 aaKnown RBP15.24■□□□□ 0.03
CCDC43-204ENST00000588687 DNM1P34Q6PK57 102 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 ZNF620Q6ZNG0 422 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 LDLRAD3Q86YD5 345 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 OR11L1Q8NGX0 322 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 LINC01006Q8NI28 216 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 SSMEM1Q8WWF3 244 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 C7orf34Q96L11 122 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 WDFY2Q96P53 400 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 TECTBQ96PL2 329 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 ATF6BQ99941 703 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 RBM4BQ9BQ04 359 aaKnown RBP15.24■□□□□ 0.03
CCDC43-204ENST00000588687 CYB5R1Q9UHQ9 305 aa15.24■□□□□ 0.03
CCDC43-204ENST00000588687 C5orf63A6NC05 138 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 M0QZ24 198 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 LGALS8O00214 317 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 SLC22A2O15244 555 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 CLPXO76031 633 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 TOX4O94842 621 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 IGHV4-59P01825 116 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 TROVE2P10155 538 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC43-204ENST00000588687 IRF2P14316 349 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 RPS6KA3P51812 740 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 FGD3Q5JSP0 725 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 SMARCD3Q6STE5 483 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 FKBP9P1Q75LS8 142 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 RRM2BQ7LG56 351 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 ZBTB46Q86UZ6 589 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 FAM86B1Q8N7N1 296 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 GATAD2BQ8WXI9 593 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 DYRK2Q92630 601 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 MAP6Q96JE9 813 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 NMNAT3Q96T66 252 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 MMADHCQ9H3L0 296 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-204ENST00000588687 ACOXLQ9NUZ1 547 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 DNAH3Q8TD57 4116 aa15.23■□□□□ 0.03
CCDC43-204ENST00000588687 IGHV1-69DA0A0B4J2H0 117 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 UNC119BA6NIH7 251 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms