RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 LOC100130705A0A1B0GUX0 176 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 ZSCAN5BA6NJL1 495 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 PRR32B1ATL7 298 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 SLC16A6O15403 523 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 TIMM8AO60220 97 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-207ENST00000588542 NCR1O76036 304 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 HPXP02790 462 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 ERCC1P07992 297 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-207ENST00000588542 SLC2A1P11166 492 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 MAGEB1P43366 347 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 ZNF81P51508 661 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 SLC25A30Q5SVS4 291 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 CLEC2AQ6UVW9 174 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 PRSS45Q7RTY3 260 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 RFLNBQ8N5W9 214 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 ZNF283Q8N7M2 679 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 RDH12Q96NR8 316 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 SMPD3Q9NY59 655 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-207ENST00000588542 NKIRAS2Q9NYR9 191 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 NKX1-2Q9UD57 310 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-207ENST00000588542 WARS2Q9UGM6 360 aaKnown RBP17.22■□□□□ 0.35
DDX39A-207ENST00000588542 H7C1Q1 480 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 ENTPD6O75354 484 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 H2BFMP0C1H6 154 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 SBK2P0C263 348 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 DAOP14920 347 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 GABRB1P18505 474 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 HSD11B1P28845 292 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 CX3CR1P49238 355 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 DSCR9P59020 149 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 GK2Q14410 553 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-207ENST00000588542 OGFRL1Q5TC84 451 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-207ENST00000588542 OR2T2Q6IF00 324 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 LRRN1Q6UXK5 716 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 Q6ZR03 302 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 PACRGLQ8N7B6 248 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 C10orf105Q8TEF2 133 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 MSL2Q9HCI7 577 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 AASSQ9UDR5 926 aa17.21■□□□□ 0.35
DDX39A-207ENST00000588542 CGGBP1Q9UFW8 167 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-207ENST00000588542 PLSCR5A0PG75 271 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 LYNX1G3V0Z9 82 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 IGHV1-46P01743 117 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 MT-ND5P03915 603 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 ADH4P08319 380 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 LYNX1P0DP58 116 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 LIPAP38571 399 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 PDLIM4P50479 330 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 PRSS12P56730 875 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 ZNF92Q03936 586 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 OCLNQ16625 522 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 GLYATL3Q5SZD4 288 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 SLC35F2Q8IXU6 374 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 ENTHD1Q8IYW4 607 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 OR51G2Q8NGK0 314 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 OR2AE1Q8NHA4 323 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 UBASH3BQ8TF42 649 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 FAM168AQ92567 244 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 COX4I2Q96KJ9 171 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 RHNO1Q9BSD3 238 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 MYOZ1Q9NP98 299 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-207ENST00000588542 C8orf4Q9NR00 106 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 CYSLTR2Q9NS75 346 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 CLN6Q9NWW5 311 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 LRP12Q9Y561 859 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 TMEM14AQ9Y6G1 99 aa17.2■□□□□ 0.34
DDX39A-207ENST00000588542 A0A096LNT2 108 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 IQCF6A8MYZ5 107 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 RNF223E7ERA6 249 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 PSMD9O00233 223 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 SPRY3O43610 288 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 LILRA1O75019 489 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 CSF3P09919 207 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 ZNF121P58317 390 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-207ENST00000588542 CCL8P80075 99 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 ROM1Q03395 351 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 MALLQ13021 153 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 CDK5R2Q13319 367 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 TMED1Q13445 227 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 PCGF3Q3KNV8 242 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 USP51Q70EK9 711 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-207ENST00000588542 OR5AS1Q8N127 324 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 ZNF786Q8N393 782 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 RHOXF1Q8NHV9 184 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 RFKQ969G6 155 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 C18orf12Q96KH6 178 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 MNTQ99583 582 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 REG4Q9BYZ8 158 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 TTTY10Q9BZA0 68 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 ZNF319Q9P2F9 582 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 N6AMT1Q9Y5N5 214 aa17.19■□□□□ 0.34
DDX39A-207ENST00000588542 LOC390937A0A1W2PQ73 354 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 VWC2LB2RUY7 222 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 APOL3O95236 402 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 APOC1P02654 83 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 ANXA2P07355 339 aaKnown RBP17.18■□□□□ 0.34
DDX39A-207ENST00000588542 FOSL1P15407 271 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 COL8A2P25067 703 aa17.18■□□□□ 0.34
DDX39A-207ENST00000588542 POU4F2Q12837 409 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms