RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
TMED1-204ENST00000588289 LOC107986453A0A1B0GWG9 222 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 DHRS7CA6NNS2 312 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 NOTOA8MTQ0 251 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 J3QW42 95 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 DVL2O14641 736 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SYNGR3O43761 229 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 FSTP19883 344 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 RPS19P39019 145 aaKnown RBP11.11□□□□□ -0.63
TMED1-204ENST00000588289 TDGF1P3P51864 188 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 GUSBP1Q15486 140 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
TMED1-204ENST00000588289 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 FAM57BQ71RH2 274 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SERPINA12Q8IW75 414 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SKA3Q8IX90 412 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 FTMTQ8N4E7 242 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 Q8NA96 180 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 OR5D14Q8NGL3 314 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SNRNP40Q96DI7 357 aaKnown RBP11.11□□□□□ -0.63
TMED1-204ENST00000588289 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 KCNS3Q9BQ31 491 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SLIRPQ9GZT3 109 aaKnown RBP11.11□□□□□ -0.63
TMED1-204ENST00000588289 NOX4Q9NPH5 578 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 RABL2AQ9UBK7 228 aaPredicted RBP11.11□□□□□ -0.63
TMED1-204ENST00000588289 PRSS50Q9UI38 385 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 SLC22A13Q9Y226 551 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 AMDHD2Q9Y303 409 aa11.11□□□□□ -0.63
TMED1-204ENST00000588289 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 PSKH1P11801 424 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 IL32P24001 234 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 NTF4P34130 210 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 PEX19P40855 299 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 KIR3DL2P43630 455 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 SOX2P48431 317 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 RAB1AP62820 205 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 PSG4Q00888 419 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ZNF45Q02386 682 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 MFGE8Q08431 387 aaPredicted RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 TBC1D28Q2M2D7 210 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ODF4Q2M2E3 257 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 PABPC1L2AQ5JQF8 200 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 C9orf135Q5VTT2 229 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ZNF774Q6NX45 483 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 LINGO2Q7L985 606 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 C1orf174Q8IYL3 243 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 IL17RDQ8NFM7 739 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 OR10S1Q8NGN2 331 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ZFAND2BQ8WV99 257 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 HSD17B8Q92506 261 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ZNF837Q96EG3 531 aaPredicted RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 BOD1Q96IK1 185 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 TECTBQ96PL2 329 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 G6PC2Q9NQR9 355 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 ABRACLQ9P1F3 81 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 EIF3KQ9UBQ5 218 aaKnown RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 ZNF629Q9UEG4 869 aaPredicted RBP11.1□□□□□ -0.63
TMED1-204ENST00000588289 CMAHPQ9Y471 501 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 V9GY05 133 aa11.1□□□□□ -0.63
TMED1-204ENST00000588289 MYO18BQ8IUG5 2567 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 A0A096LPE4 126 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 MSTNO14793 375 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 LRRTM2O43300 516 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
TMED1-204ENST00000588289 PNPP00491 289 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 TTRP02766 147 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 LCATP04180 440 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 COX5AP20674 150 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 STOMP27105 288 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 SCAND1P57086 179 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 FAM189A2Q15884 450 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 IDNKQ5T6J7 187 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 OTPQ5XKR4 325 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 SFXN4Q6P4A7 337 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 MRGPRGQ86SM5 289 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 ZNF671Q8TAW3 534 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 PP6455Q8WZ26 134 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
TMED1-204ENST00000588289 BORCS5Q969J3 196 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
TMED1-204ENST00000588289 TRMT61AQ96FX7 289 aaKnown RBP11.09□□□□□ -0.63
TMED1-204ENST00000588289 NXF2Q9GZY0 626 aaKnown RBP11.09□□□□□ -0.63
TMED1-204ENST00000588289 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 ASF1BQ9NVP2 202 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 ZNF835Q9Y2P0 537 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 N6AMT1Q9Y5N5 214 aa11.09□□□□□ -0.63
TMED1-204ENST00000588289 CFAP46Q8IYW2 2715 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms