RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 FAM20BO75063 409 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 RENP00797 406 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 HLA-DQA2P01906 255 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 ACSM4P0C7M7 580 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 RHCEP18577 417 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 COX10Q12887 443 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 MALLQ13021 153 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 KRT72Q14CN4 511 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 MPPED2Q15777 294 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 WDR25Q64LD2 544 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 SFRP4Q6FHJ7 346 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 GLYATQ6IB77 296 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 PGM2L1Q6PCE3 622 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 FIP1L1Q6UN15 594 aaKnown RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 ZNF841Q6ZN19 808 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 DCDC5Q6ZRR9 648 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 COLCA1Q6ZS62 124 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 OR4K13Q8NH42 304 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 SPRYD4Q8WW59 207 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 TECTBQ96PL2 329 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 KRCC1Q9NPI7 259 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
ERCC1-205ENST00000587888 TMCC3Q9ULS5 477 aa11.79□□□□□ -0.52
ERCC1-205ENST00000587888 FSTL3O95633 263 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 KNG1P01042 644 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 SFTPBP07988 381 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 H2AFXP16104 143 aaPredicted RBP11.78□□□□□ -0.52
ERCC1-205ENST00000587888 HIST1H1CP16403 213 aaKnown RBP11.78□□□□□ -0.52
ERCC1-205ENST00000587888 CA6P23280 308 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 NOS3P29474 1203 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 GATA4P43694 442 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 NUDT2P50583 147 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 OR8G1Q15617 311 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 RFX4Q33E94 735 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 SLC36A3Q495N2 470 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 MIDNQ504T8 468 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 SLC18B1Q6NT16 456 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 C8orf82Q6P1X6 216 aaPredicted RBP11.78□□□□□ -0.52
ERCC1-205ENST00000587888 Q6YL49 198 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 PGAP1Q75T13 922 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 C7orf34Q96L11 122 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 ATF6BQ99941 703 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 IFT27Q9BW83 186 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 NSRP1Q9H0G5 558 aaKnown RBP11.78□□□□□ -0.52
ERCC1-205ENST00000587888 FN3KQ9H479 309 aa11.78□□□□□ -0.52
ERCC1-205ENST00000587888 DOCK11Q5JSL3 2073 aa11.77□□□□□ -0.52
ERCC1-205ENST00000587888 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 SRRM5B3KS81 715 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 C22orf46C9J442 243 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 PHYHO14832 338 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
ERCC1-205ENST00000587888 SLC6A6P31641 620 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 CD200P41217 278 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 RAD23AP54725 363 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 TRAP1Q12931 704 aaKnown RBP11.77□□□□□ -0.53
ERCC1-205ENST00000587888 ECH1Q13011 328 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 OR8B8Q15620 311 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 CLEC12AQ5QGZ9 265 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 MRPL21Q7Z2W9 205 aaKnown RBP11.77□□□□□ -0.53
ERCC1-205ENST00000587888 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 FANK1Q8TC84 345 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 Q8TCH9 128 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 OR52D1Q9H346 318 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 PRDM13Q9H4Q3 707 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 BEX1Q9HBH7 125 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 DCAF13Q9NV06 445 aaKnown RBP11.77□□□□□ -0.53
ERCC1-205ENST00000587888 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 MMP24Q9Y5R2 645 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 V9GYQ6 96 aa11.77□□□□□ -0.53
ERCC1-205ENST00000587888 MEGF8Q7Z7M0 2845 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 NDUFAB1O14561 156 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 CCDC22O60826 627 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 GMNNO75496 209 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 TOX4O94842 621 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 GADD45GO95257 159 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 GGT2P36268 569 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 CFHR2P36980 270 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 PSMB10P40306 273 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 RAG2P55895 527 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 TPTEP56180 551 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 PSME3P61289 254 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 ZNF362Q5T0B9 420 aaPredicted RBP11.76□□□□□ -0.53
ERCC1-205ENST00000587888 SLC35F1Q5T1Q4 408 aa11.76□□□□□ -0.53
ERCC1-205ENST00000587888 CD276Q5ZPR3 534 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms