RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SLC17A5Q9NRA2 495 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 DMXL2Q8TDJ6 3036 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 CALCBP10092 127 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 CRYGSP22914 178 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 ANOS1P23352 680 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 RPUSD3Q6P087 351 aaKnown RBP17.37■□□□□ 0.37
TRIM47-204ENST00000587339 ZNF627Q7L945 461 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 PLPP7Q8NBV4 271 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 OR4M1Q8NGD0 313 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 AKR7LQ8NHP1 331 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 FGFBP3Q8TAT2 258 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 PRSS50Q9UI38 385 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 LHX6Q9UPM6 363 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 PRRC2CQ9Y520 2896 aaKnown RBP17.37■□□□□ 0.37
TRIM47-204ENST00000587339 TTLL8A6PVC2 850 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 SS18L1O75177 396 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-204ENST00000587339 IL7P13232 177 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 GNALP38405 381 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 HTR5AP47898 357 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 FOXG1P55316 489 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-204ENST00000587339 OXA1LQ15070 435 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 DRAM2Q6UX65 266 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 Q6ZNX1 250 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 POC5Q8NA72 575 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 OR1J2Q8NGS2 313 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 CMTM3Q96MX0 182 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 STEAP1Q9UHE8 339 aa17.37■□□□□ 0.37
TRIM47-204ENST00000587339 A0A096LPE4 126 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 A0A1W2PPZ6 126 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 MEGF11A6BM72 1044 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 OR14I1A6ND48 311 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 OR6C6A6NF89 314 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 E9PLN8 166 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 MMP7P09237 267 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-204ENST00000587339 CCL1P22362 96 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 TPTEP56180 551 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 DEFA1P59665 94 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 DEFA3P59666 94 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 RIN1Q13671 783 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 PLEKHN1Q494U1 663 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-204ENST00000587339 SLC36A2Q495M3 483 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 UBE2NLQ5JXB2 153 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 FBXW9Q5XUX1 488 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 GLT8D1Q68CQ7 371 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 DOK3Q7L591 496 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 Q8N402 240 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 OR51A2Q8NGJ7 313 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 OR5D14Q8NGL3 314 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 ADAT3Q96EY9 351 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-204ENST00000587339 FAM71F1Q96KD3 344 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-204ENST00000587339 WNT5BQ9H1J7 359 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 RNF121Q9H920 327 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 ACACAQ13085 2346 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 BOD1L1Q8NFC6 3051 aa17.36■□□□□ 0.37
TRIM47-204ENST00000587339 A0A0G2JMP0 313 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 A0A0U1RQV5 110 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 A0A0X1KG70 313 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 A6NIN4 97 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 CRYABP02511 175 aaKnown RBP17.35■□□□□ 0.37
TRIM47-204ENST00000587339 ITGA5P08648 1049 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 OCMP0CE72 109 aaPredicted RBP17.35■□□□□ 0.37
TRIM47-204ENST00000587339 ZNF20P17024 532 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 CFPP27918 469 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 PITPNBP48739 271 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 GCNT2Q8N0V5 402 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 DTX3Q8N9I9 347 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 OR4M2Q8NGB6 313 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 LUZP4Q9P127 313 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 OR5V1Q9UGF6 321 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 hCG_2014768A0A024R1R8 64 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 C5orf63A6NC05 138 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 CSF3P09919 207 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 OR3A2P47893 321 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 SPOCK1Q08629 439 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 SFRP5Q5T4F7 317 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 MINDY2Q8NBR6 621 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 OR52H1Q8NGJ2 320 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 SOX7Q9BT81 388 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 ZNF224Q9NZL3 707 aa17.35■□□□□ 0.37
TRIM47-204ENST00000587339 SPENQ96T58 3664 aaKnown RBP17.34■□□□□ 0.37
TRIM47-204ENST00000587339 AHRRA9YTQ3 701 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 SLC17A2O00624 439 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 SCAND1P57086 179 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 SCN1BQ07699 218 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 TBR1Q16650 682 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 PABPC1L2AQ5JQF8 200 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 FAM214BQ7L5A3 538 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 NKAIN3Q8N8D7 197 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 EXTL1Q92935 676 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 WNT2BQ93097 391 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 COX4I2Q96KJ9 171 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 PLEKHA1Q9HB21 404 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 TP53TG5Q9Y2B4 290 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 ETV7Q9Y603 341 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 FREM1Q5H8C1 2179 aa17.34■□□□□ 0.37
TRIM47-204ENST00000587339 A0A1W2PQ09 198 aa17.33■□□□□ 0.37
TRIM47-204ENST00000587339 IGLV3-1P01715 115 aa17.33■□□□□ 0.37
TRIM47-204ENST00000587339 MPGP29372 298 aa17.33■□□□□ 0.37
TRIM47-204ENST00000587339 DDOSTP39656 456 aa17.33■□□□□ 0.37
TRIM47-204ENST00000587339 OR10A2Q9H208 303 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms