RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 HIST2H3AQ71DI3 136 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 PGAP1Q75T13 922 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 BTN2A1Q7KYR7 527 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 AAED1Q7RTV5 226 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 IZUMO1Q8IYV9 350 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 ZNF283Q8N7M2 679 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 CLEC1AQ8NC01 280 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 OR1M1Q8NGA1 313 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 OR5D14Q8NGL3 314 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 OR10D3Q8NH80 312 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 CPT1CQ8TCG5 803 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 NKD1Q969G9 470 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 SLC25A28Q96A46 364 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 TMEM45BQ96B21 275 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 UPRTQ96BW1 309 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 ZNF385AQ96PM9 386 aaKnown RBP9.95□□□□□ -0.82
LIG3-204ENST00000585740 UQCC2Q9BRT2 126 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 ZNF416Q9BWM5 594 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 RBM24Q9BX46 236 aaKnown RBP9.95□□□□□ -0.82
LIG3-204ENST00000585740 CACNG6Q9BXT2 260 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 TMEM138Q9NPI0 162 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
LIG3-204ENST00000585740 PAQR5Q9NXK6 330 aaPredicted RBP9.95□□□□□ -0.82
LIG3-204ENST00000585740 EMC3Q9P0I2 261 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 FLVCR1Q9Y5Y0 555 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 MRPS18BQ9Y676 258 aaKnown RBP9.95□□□□□ -0.82
LIG3-204ENST00000585740 MED12Q93074 2177 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 ITPR1Q14643 2758 aa9.95□□□□□ -0.82
LIG3-204ENST00000585740 LAMA5O15230 3695 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 TMEM272A0A1B0GTI8 110 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ANKRD20A5PA0PJZ0 165 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 GGT3PA6NGU5 568 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ZNF716A6NP11 495 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 H0YC42 278 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 CXCL13O43927 109 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 CYTIPO60759 359 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 RBBP9O75884 186 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 TCRBP04435 133 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 CST2P09228 141 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 RFPL3SP0C7P2 107 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ARSBP15848 533 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 BTCP35070 178 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 SRP9P49458 86 aaKnown RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 SELENOPP49908 381 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 PRKXP51817 358 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ZNF121P58317 390 aaPredicted RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 ECH1Q13011 328 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ENDOGQ14249 297 aaKnown RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 STK11Q15831 433 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 RNASE12Q5GAN4 147 aaKnown RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 ATAD3CQ5T2N8 411 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 RIPPLY2Q5TAB7 128 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 FAM27BQ5VT28 67 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 SPINK14Q6IE38 97 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 SLC25A25Q6KCM7 469 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 GPR137CQ8N3F9 429 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 SLC22A24Q8N4F4 322 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 JAGN1Q8N5M9 183 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 MEIOBQ8N635 442 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 PLPP7Q8NBV4 271 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 DEFB124Q8NES8 71 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 OR1J2Q8NGS2 313 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 AKAP1Q92667 903 aaKnown RBP eCLIP9.94□□□□□ -0.82
LIG3-204ENST00000585740 SPTSSAQ969W0 71 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 NABP1Q96AH0 204 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 FGGYQ96C11 551 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 PGAM5Q96HS1 289 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 ZNF703Q9H7S9 590 aaPredicted RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 AUNIPQ9H7T9 357 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 KLK13Q9UKR3 277 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 RAB22AQ9UL26 194 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 PAIP2BQ9ULR5 123 aaKnown RBP9.94□□□□□ -0.82
LIG3-204ENST00000585740 MSRB2Q9Y3D2 182 aa9.94□□□□□ -0.82
LIG3-204ENST00000585740 AHCTF1Q8WYP5 2266 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 A0A0B4J293 547 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 A0A0U1RQV5 110 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 A0A1B0GTI1 187 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 C7orf66A4D0T2 115 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 PINLYPA6NC86 204 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 METTL21EPA6NDL7 271 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 OR6C65A6NJZ3 312 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 KLRC4-KLRK1H3BQV0 150 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 H7C417 338 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 RER1O15258 196 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 PRAF2O60831 178 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SYNGR4O95473 234 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 BPNT1O95861 308 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 ALDOBP05062 364 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 CSF1P09603 554 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 H2AFB2P0C5Z0 115 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 CD46P15529 392 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 GIFP27352 417 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SOX8P57073 446 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 RRAS2P62070 204 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms