RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 DCDC5Q6ZRR9 648 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 ARHGAP24Q8N264 748 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 RNF148Q8N7C7 305 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 RSRC1Q96IZ7 334 aaKnown RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 C7orf34Q96L11 122 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 DHRS1Q96LJ7 313 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 B9D1Q9UPM9 204 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 NOP16Q9Y3C1 178 aaKnown RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 H0YL77 283 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 PHYHO14832 338 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 IDH3BO43837 385 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 LIPFP07098 398 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 IGHV4-38-2P0DP08 117 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 NCK1P16333 377 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 RBMXP38159 391 aaKnown RBP12.53□□□□□ -0.4
VAPA-209ENST00000585042 CD200P41217 278 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 PITPNBP48739 271 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 FXYD6P3P58550 94 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 MALLQ13021 153 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 KCNJ8Q15842 424 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 MOGAT3Q86VF5 341 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 OR11L1Q8NGX0 322 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
VAPA-209ENST00000585042 FUZQ9BT04 418 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 GORASP2Q9H8Y8 452 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
VAPA-209ENST00000585042 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
VAPA-209ENST00000585042 F5H5P2 479 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 DCTN6O00399 190 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 KCNAB3O43448 404 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 PPP1R3DO95685 299 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 RENP00797 406 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 PSMB10P40306 273 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 PMELP40967 661 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 CENPAP49450 140 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 MAB21L1Q13394 359 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 RFX4Q33E94 735 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 CD276Q5ZPR3 534 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.41
VAPA-209ENST00000585042 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 ZNF841Q6ZN19 808 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 ZBTB46Q86UZ6 589 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 OR6V1Q8N148 313 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 SLC26A10Q8NG04 563 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 TMIGD2Q96BF3 282 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 NSMCE2Q96MF7 247 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 ERMAPQ96PL5 475 aaPredicted RBP12.52□□□□□ -0.41
VAPA-209ENST00000585042 CDADC1Q9BWV3 514 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 SRA1Q9HD15 236 aaKnown RBP12.52□□□□□ -0.41
VAPA-209ENST00000585042 TRIM36Q9NQ86 728 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 DCAF13Q9NV06 445 aaKnown RBP12.52□□□□□ -0.41
VAPA-209ENST00000585042 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.41
VAPA-209ENST00000585042 TRBV4-1A0A0J9YWV2 114 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 NDUFA2O43678 99 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
VAPA-209ENST00000585042 GMDSO60547 372 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 ZNF205O95201 554 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 SLC6A6P31641 620 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 GK2Q14410 553 aaPredicted RBP12.51□□□□□ -0.41
VAPA-209ENST00000585042 SEC23BQ15437 767 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 MEP1BQ16820 701 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 SLC18B1Q6NT16 456 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 TRPM8Q7Z2W7 1104 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 JAZF1Q86VZ6 243 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 BHLHE23Q8NDY6 225 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 FAM71F1Q96KD3 344 aaPredicted RBP12.51□□□□□ -0.41
VAPA-209ENST00000585042 PITX2Q99697 317 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 ATF6BQ99941 703 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
VAPA-209ENST00000585042 TRAV40A0A0B4J280 105 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 SRRM5B3KS81 715 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 F5H5K5 113 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
VAPA-209ENST00000585042 GPANK1O95872 356 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 RAD23AP54725 363 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 TPTEP56180 551 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
VAPA-209ENST00000585042 CORO6Q6QEF8 472 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 Q6YL49 198 aa12.5□□□□□ -0.41
VAPA-209ENST00000585042 PGAP1Q75T13 922 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms