RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 COPS4Q9BT78 406 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 OSBPL10Q9BXB5 764 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 GABARAPL1Q9H0R8 117 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MED20Q9H944 212 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CENPMQ9NSP4 180 aa11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MYEF2Q9P2K5 600 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-234ENST00000584525 LOC100509620A0A075B734 347 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SURF4O15260 269 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 PRODHO43272 600 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 GLCEO94923 617 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ANPEPP15144 967 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 GSTT1P30711 240 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 LMO4P61968 165 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MALLQ13021 153 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 EIF2B1Q14232 305 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CCDC92Q53HC0 331 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 TMEM236Q5W0B7 351 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SLC18B1Q6NT16 456 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 DCXRQ7Z4W1 244 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 PKP2Q99959 881 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 C9orf16Q9BUW7 83 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 LHFPL6Q9Y693 200 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 COMMD3-BMI1R4GMX3 469 aa11.16□□□□□ -0.62
CDK5RAP3-234ENST00000584525 H3BSA7 217 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ZNF593O00488 134 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CDC14BO60729 498 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 NCR1O76036 304 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 AVPP01185 164 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 LCATP04180 440 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CLUP10909 449 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 TUBG1P23258 451 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 WNT5AP41221 380 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MAGEB1P43366 347 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SLC15A1P46059 708 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CDC42P60953 191 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CDK5Q00535 292 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MVKQ03426 396 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ZSCAN26Q16670 478 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SLC35D3Q5M8T2 416 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 C1orf229Q6ZS94 237 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 RFPL4BQ6ZWI9 263 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CPOQ8IVL8 374 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ZNF101Q8IZC7 436 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SLC7A6Q92536 515 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 APOBEC3DQ96AK3 386 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CIB1Q99828 191 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 ZNF665Q9H7R5 613 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 S100A14Q9HCY8 104 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 TUBG2Q9NRH3 451 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CYSLTR2Q9NS75 346 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 DECR2Q9NUI1 292 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 TBCCD1Q9NVR7 557 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 MRPL22Q9NWU5 206 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 IMPAD1Q9NX62 359 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CGGBP1Q9UFW8 167 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 CYB5R1Q9UHQ9 305 aa11.15□□□□□ -0.62
CDK5RAP3-234ENST00000584525 A0A0G2JMP0 313 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 A0A0X1KG70 313 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF878C9JN71 531 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 J3QW42 95 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 M0R135 149 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 MITFO75030 526 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 RP2O75695 350 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 CLPTM1O96005 669 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 APOC1P02654 83 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 DBHP09172 617 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF250P15622 560 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 TNFSF4P23510 183 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 LIPAP38571 399 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 RPS27P42677 84 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF81P51508 661 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 DBPQ10586 325 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 APOFQ13790 326 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 PCGF3Q3KNV8 242 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 AWAT1Q58HT5 328 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 AVPI1Q5T686 147 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 LYPD4Q6UWN0 246 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 CFAP77Q6ZQR2 320 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 SPATC1Q76KD6 591 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 BPIFB2Q8N4F0 458 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF511Q8NB15 262 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 OR4M2Q8NGB6 313 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 KLF14Q8TD94 323 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 EME1Q96AY2 570 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 SLAMF6Q96DU3 332 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 SLC6A7Q99884 636 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 HCAR1Q9BXC0 346 aa11.14□□□□□ -0.63
CDK5RAP3-234ENST00000584525 NMNAT2Q9BZQ4 307 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms