RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 RHOUQ7L0Q8 258 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 C10orf67Q8IYJ2 551 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 LINC01356Q8N9X3 169 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 OR10S1Q8NGN2 331 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 SP140LQ9H930 580 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 MARCH7Q9H992 704 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 CDC42EP3Q9UKI2 254 aa23.07■■□□□ 1.28
SMARCD2-210ENST00000584400 IQCF6A8MYZ5 107 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 CHRFAM7AQ494W8 412 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 PGAP1Q75T13 922 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 DPY19L4Q7Z388 723 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 CPOQ8IVL8 374 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 OR5AS1Q8N127 324 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 ST7LQ8TDW4 575 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 LRTOMTQ8WZ04 291 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 CENPNQ96H22 339 aaPredicted RBP23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 GABARAPL1Q9H0R8 117 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 TVP23BQ9NYZ1 205 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 LPAR3Q9UBY5 353 aa23.06■■□□□ 1.28
SMARCD2-210ENST00000584400 CSPG4Q6UVK1 2322 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 HSD11B1P28845 292 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 RPS7P62081 194 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 GK2Q14410 553 aaPredicted RBP23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 PTGES3Q15185 160 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 TMEM236Q5W0B7 351 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 CXXC5Q7LFL8 322 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 MRPL21Q7Z2W9 205 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 AMIGO2Q86SJ2 522 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 NAA40Q86UY6 237 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 ZNF454Q8N9F8 522 aa23.05■■□□□ 1.28
SMARCD2-210ENST00000584400 SETD2Q9BYW2 2564 aaPredicted RBP23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 Q6ZR03 302 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 TIGD4Q8IY51 512 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 CLDND2Q8NHS1 167 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 ZMYND19Q96E35 227 aaPredicted RBP23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 C1orf159Q96HA4 380 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 OSBPL10Q9BXB5 764 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 OPA3Q9H6K4 179 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 NARFLQ9H6Q4 476 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 TMEM100Q9NV29 134 aa23.04■■□□□ 1.28
SMARCD2-210ENST00000584400 B4DSR2 109 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 PSKH1P11801 424 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 PRKXP51817 358 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 CDH15P55291 814 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 ACTR3P61158 418 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 MVKQ03426 396 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 KDM4DQ6B0I6 523 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 ZNF283Q8N7M2 679 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 RNF133Q8WVZ7 376 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 SPRYD4Q8WW59 207 aaPredicted RBP23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 SLC30A2Q9BRI3 323 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 ABHD6Q9BV23 337 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 SLC22A4Q9H015 551 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 NOP16Q9Y3C1 178 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 WIPI2Q9Y4P8 454 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 CACNG2Q9Y698 323 aa23.03■■□□□ 1.28
SMARCD2-210ENST00000584400 RTTNQ86VV8 2226 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 ANPEPP15144 967 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 PCMT1P22061 227 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 IL2RGP31785 369 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 SRP9P49458 86 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 LCN1P1Q5VSP4 162 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 ZFP1Q6P2D0 407 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 RAB39BQ96DA2 213 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 OR2V2Q96R30 315 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 BEX2Q9BXY8 128 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 SHARPINQ9H0F6 387 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 NF1P21359 2839 aa23.02■■□□□ 1.28
SMARCD2-210ENST00000584400 IFNL4K9M1U5 179 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 XRCC2O43543 280 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 LYNP07948 512 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 HNF1AP20823 631 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 RAD23AP54725 363 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 AVPI1Q5T686 147 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 SPATC1Q76KD6 591 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 BHLHE23Q8NDY6 225 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 OTOSQ8NHW6 89 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 SEMA6AQ9H2E6 1030 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 TMEM106BQ9NUM4 274 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 TREM2Q9NZC2 230 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 H2AFY2Q9P0M6 372 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 PPP1R3CQ9UQK1 317 aa23.01■■□□□ 1.27
SMARCD2-210ENST00000584400 ZFHX3Q15911 3703 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 H2BFMP0C1H6 154 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 IGFBP5P24593 272 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 CX3CR1P49238 355 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 APOFQ13790 326 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 SNAI3Q3KNW1 292 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 THEM6Q8WUY1 208 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 ITLN1Q8WWA0 313 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 PYDC1Q8WXC3 89 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 SOX7Q9BT81 388 aa23■■□□□ 1.27
SMARCD2-210ENST00000584400 GGT3PA6NGU5 568 aa22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 ANXA2P07355 339 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 SLX4IPQ5VYV7 408 aa22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 OR52H1Q8NGJ2 320 aa22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 RBM4BQ9BQ04 359 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 REPIN1Q9BWE0 567 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-210ENST00000584400 OAZ3Q9UMX2 235 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms