RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 OR6V1Q8N148 313 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 ATG16L2Q8NAA4 619 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 OR8G5Q8NG78 346 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 OR13G1Q8NGZ3 307 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 ITLN1Q8WWA0 313 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 ZNF582Q96NG8 517 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-206ENST00000584112 HCAR1Q9BXC0 346 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 C7orf69Q9H7B7 122 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 PTTG3PQ9NZH4 202 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 ACTR3BQ9P1U1 418 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 IQCF6A8MYZ5 107 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 AVPP01185 164 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 MDKP21741 143 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 MDH2P40926 338 aaKnown RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 SRP9P49458 86 aaKnown RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 LCN2P80188 198 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 MALLQ13021 153 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 HLXQ14774 488 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 OR2T2Q6IF00 324 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 SLC18B1Q6NT16 456 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 PGBD2Q6P3X8 592 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 COLCA1Q6ZS62 124 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 C1orf229Q6ZS94 237 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 ZNF771Q7L3S4 317 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 LRRC28Q86X40 367 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 LINC00346Q8IVM7 164 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 MUC20Q8N307 709 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 SDR9C7Q8NEX9 313 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 OR52E2Q8NGJ4 325 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 POP5Q969H6 163 aaKnown RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 PITX2Q99697 317 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 ATF6BQ99941 703 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 SUCNR1Q9BXA5 334 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 TRIM15Q9C019 465 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 MUC13Q9H3R2 512 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 PATZ1Q9HBE1 687 aaKnown RBP9.35□□□□□ -0.91
CCDC47-206ENST00000584112 DCAF16Q9NXF7 216 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 CYB5R1Q9UHQ9 305 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 LYVE1Q9Y5Y7 322 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 CDH10Q9Y6N8 788 aa9.35□□□□□ -0.91
CCDC47-206ENST00000584112 PLXNB1O43157 2135 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 OR6C68A6NDL8 312 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 F5H5K5 113 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 TMEM178BH3BS89 294 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 M0QZ24 198 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 TNFRSF11BO00300 401 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 TSPAN15O95858 294 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 ZNF823P16415 610 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 CPT2P23786 658 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 ERFP50548 548 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 MMP16P51512 607 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 HMGA2P52926 109 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 TPTEP56180 551 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC47-206ENST00000584112 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 ESCO2Q56NI9 601 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 SLC35F1Q5T1Q4 408 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 CYP2R1Q6VVX0 501 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 CFAP77Q6ZQR2 320 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 BPIFB2Q8N4F0 458 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 OR10AD1Q8NGE0 317 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 OR2T4Q8NH00 348 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 SIGLEC11Q96RL6 698 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 RBM4BQ9BQ04 359 aaKnown RBP9.34□□□□□ -0.91
CCDC47-206ENST00000584112 SLC30A2Q9BRI3 323 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 FN3KQ9H479 309 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 MAGIXQ9H6Y5 334 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 EGLN3Q9H6Z9 239 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 GCM1Q9NP62 436 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 TMEM100Q9NV29 134 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 IL20Q9NYY1 176 aa9.34□□□□□ -0.91
CCDC47-206ENST00000584112 POLR3KQ9Y2Y1 108 aaPredicted RBP9.34□□□□□ -0.91
CCDC47-206ENST00000584112 A8MXK9 166 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 F5H0A9 414 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-206ENST00000584112 BHLHE40O14503 412 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 CCNB2O95067 398 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 LCATP04180 440 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 ACSM4P0C7M7 580 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 ADRA2CP18825 462 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 FPR2P25090 351 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 GGT2P36268 569 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 MAGEA2P43356 314 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 GYS2P54840 703 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 IL13RA1P78552 427 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 TRAP1Q12931 704 aaKnown RBP9.33□□□□□ -0.92
CCDC47-206ENST00000584112 ZMYND11Q15326 602 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF181Q2M3W8 571 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 ARMCX4Q5H9R4 360 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 CLEC12AQ5QGZ9 265 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 RASSF6Q6ZTQ3 369 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
CCDC47-206ENST00000584112 BHLHE23Q8NDY6 225 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms