RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ZFP41Q8N8Y5 198 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 ZNF721Q8TF20 911 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 LRRC29Q8WV35 223 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 NRGNQ92686 78 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 NRBF2Q96F24 287 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 JSRP1Q96MG2 331 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 ZNF488Q96MN9 340 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 GPR21Q99679 349 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 RTBDNQ9BSG5 229 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 ING2Q9H160 280 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 TMEM38AQ9H6F2 299 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 MRPS30Q9NP92 439 aaKnown RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 PDP1Q9P0J1 537 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 GCNT4Q9P109 453 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 MTFP1Q9UDX5 166 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 TSSC4Q9Y5U2 329 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 INSRP06213 1382 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 K7EMT4 169 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 DNALI1O14645 258 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 EIF3HO15372 352 aaKnown RBP eCLIP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 EIF1BO60739 113 aaKnown RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 GLSO94925 669 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 IGHV3-11P01762 117 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 HLA-HP01893 362 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 CD5P06127 495 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 CTRB1P17538 263 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 IL32P24001 234 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 EIF1P41567 113 aaKnown RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 PITPNAQ00169 270 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 KDSRQ06136 332 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 ALKBH6Q3KRA9 238 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 DNLZQ5SXM8 178 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 FAM222AQ5U5X8 452 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 SAXO2Q658L1 398 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 TWF2Q6IBS0 349 aaKnown RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 CBLN2Q8IUK8 224 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 APRG1Q8IVJ8 170 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 TMEM256Q8N2U0 113 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 OR52P1PQ8NH57 321 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 COL21A1Q96P44 957 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 OPALINQ96PE5 141 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 C11orf70Q9BRQ4 267 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 TIMM29Q9BSF4 260 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 MTG1Q9BT17 334 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 CALN1Q9BXU9 219 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 ZNF717Q9BY31 904 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 SAMD10Q9BYL1 202 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 EDA2RQ9HAV5 297 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 TMEM27Q9HBJ8 222 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 MYOZ1Q9NP98 299 aaPredicted RBP2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 C8orf17Q9NRJ1 99 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 RHBDL2Q9NX52 303 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 DCAF16Q9NXF7 216 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 WIF1Q9Y5W5 379 aa2.12□□□□□ -2.07
PPP4R1-227ENST00000583988 IGKV1D-17A0A075B6S4 117 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 IGHV1-69DA0A0B4J2H0 117 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 SYCE1LA8MT33 242 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 KRBOX1C9JBD0 128 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 L7N2F9 121 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PAHP00439 452 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 IGKV1-17P01599 117 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 GLAP06280 429 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 CLTAP09496 248 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 ZNF14P17017 642 aaPredicted RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RAB4AP20338 218 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 ME2P23368 584 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 MYL9P24844 172 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PFN2P35080 140 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PCK1P35558 622 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 CLDN18P56856 261 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 TAS2R31P59538 309 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RPL23P62829 140 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 CDK5Q00535 292 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PPIDQ08752 370 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 ZNF616Q08AN1 781 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 CUL2Q13617 745 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PRR9Q5T870 116 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 TMEM53Q6P2H8 277 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 EIF3MQ7L2H7 374 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 NKAIN4Q8IVV8 208 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 SPANXA2-OT1Q8N9U9 137 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 UBAC2Q8NBM4 344 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 APCDD1LQ8NCL9 501 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 CIRBP-AS1Q8TBR5 109 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 HAUS1Q96CS2 278 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RMI2Q96E14 147 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 PANX1Q96RD7 426 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 ULBP2Q9BZM5 246 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 UCK2Q9BZX2 261 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 FGF23Q9GZV9 251 aaPredicted RBP2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 VPS37BQ9H9H4 285 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 RETNQ9HD89 108 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 SCN1AP35498 2009 aa2.11□□□□□ -2.07
PPP4R1-227ENST00000583988 IGHV3-72A0A0B4J1Y9 119 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 IGKV1-8A0A0C4DH67 115 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 A0A1B0GUH1 482 aa2.1□□□□□ -2.07
PPP4R1-227ENST00000583988 TSPAN11A1L157 253 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms