RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TP53I3Q53FA7 332 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 LIPNQ5VXI9 398 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 SP5Q6BEB4 398 aaPredicted RBP10.09□□□□□ -0.79
CDRT1-207ENST00000583965 ZNF544Q6NX49 715 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 ZNF283Q8N7M2 679 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 NANOGP1Q8N7R0 232 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 SLC7A6Q92536 515 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 C4orf36Q96KX1 117 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 C4orf45Q96LM5 186 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 COG8Q96MW5 612 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 DOK1Q99704 481 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 BCL7BQ9BQE9 202 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 MOB1AQ9H8S9 216 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 TBCCD1Q9NVR7 557 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 CLEC2DQ9UHP7 191 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 LSM2Q9Y333 95 aaKnown RBP10.09□□□□□ -0.79
CDRT1-207ENST00000583965 GRIP1Q9Y3R0 1128 aa10.09□□□□□ -0.79
CDRT1-207ENST00000583965 RAI1Q7Z5J4 1906 aaPredicted RBP10.09□□□□□ -0.79
CDRT1-207ENST00000583965 DSCAMO60469 2012 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 A1L4Q6 167 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 DEFB108AA8MXU0 73 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 H3BSA7 217 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 ABCD4O14678 606 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 CCL2P13500 99 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 COX6B1P14854 86 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 CCNOP22674 350 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 TUBG1P23258 451 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 CALCRP30988 508 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 RAD52P43351 418 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 SLC6A9P48067 706 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 PRKXP51817 358 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 GBX2P52951 348 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-207ENST00000583965 TMBIM6P55061 237 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 FDX2Q6P4F2 183 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 COLCA1Q6ZS62 124 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 PAQR4Q8N4S7 273 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF485Q8NCK3 441 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 OR5L1Q8NGL2 311 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 APOBEC3DQ96AK3 386 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-207ENST00000583965 PELI1Q96FA3 418 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 BCL2L14Q9BZR8 327 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 ISYNA1Q9NPH2 558 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 TUBG2Q9NRH3 451 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 ACOXLQ9NUZ1 547 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
CDRT1-207ENST00000583965 R4GMQ9 66 aa10.08□□□□□ -0.8
CDRT1-207ENST00000583965 CENPEQ02224 2701 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 CELSR2Q9HCU4 2923 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ARFGEF3Q5TH69 2177 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 TRIM64BA6NI03 449 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 A6NNC1 897 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 MAGEB4O15481 346 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 SIAH2O43255 324 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 SMPD2O60906 423 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 SRSF10O75494 262 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 RPP14O95059 124 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 LCATP04180 440 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 LCKP06239 509 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ANXA2P07355 339 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 NR4A1P22736 598 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 LOXP28300 417 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 WNT5AP41221 380 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 TGM4P49221 684 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 UCP2P55851 309 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF121P58317 390 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 TAS2R43P59537 309 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 RPS23P62266 143 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 BDH1Q02338 343 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 HGFACQ04756 655 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 CCDC58Q4VC31 144 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 OR2G6Q5TZ20 316 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 SLC22A25Q6T423 547 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 PRSS45Q7RTY3 260 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ANKRD13BQ86YJ7 626 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 NUP37Q8NFH4 326 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 OR52H1Q8NGJ2 320 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 SPRYD4Q8WW59 207 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 YIPF6Q96EC8 236 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 PIK3IP1Q96FE7 263 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 TMEM204Q9BSN7 226 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ISG20L2Q9H9L3 353 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 TRIM36Q9NQ86 728 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 FAM206AQ9NX38 181 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 BABAM2Q9NXR7 383 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 RNF115Q9Y4L5 304 aa10.07□□□□□ -0.8
CDRT1-207ENST00000583965 CHD3Q12873 2000 aaKnown RBP10.07□□□□□ -0.8
CDRT1-207ENST00000583965 ATP6V1G2-DDX39BF2Z307 99 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 XRCC2O43543 280 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 CCR9P51686 369 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 NKX6-1P78426 367 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-207ENST00000583965 SPOCK1Q08629 439 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 SPHARQ15513 63 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 TIGD6Q17RP2 521 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 BCL2L15Q5TBC7 163 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms