RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ZNF665Q9H7R5 613 aa8.37□□□□□ -1.07
SKA2-208ENST00000583927 ZNF556Q9HAH1 456 aa8.37□□□□□ -1.07
SKA2-208ENST00000583927 PDP1Q9P0J1 537 aaPredicted RBP8.37□□□□□ -1.07
SKA2-208ENST00000583927 TMEFF2Q9UIK5 374 aaPredicted RBP8.37□□□□□ -1.07
SKA2-208ENST00000583927 NOP16Q9Y3C1 178 aaKnown RBP8.37□□□□□ -1.07
SKA2-208ENST00000583927 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 FAM157AC9JC47 383 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 ZNF878C9JN71 531 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PPIAL4DF5H284 164 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 F5H5K5 113 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 H3BN98 237 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 ZNF593O00488 134 aaPredicted RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 PRODHO43272 600 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 GLCEO94923 617 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 IGHV2-70P01814 119 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PAICSP22234 425 aaKnown RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 GATA3P23771 443 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 GATA4P43694 442 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 CCNIQ14094 377 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 GK2Q14410 553 aaPredicted RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 HLXQ14774 488 aaPredicted RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 OR2T2Q6IF00 324 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 SHQ1Q6PI26 577 aaKnown RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 SHFQ7M4L6 423 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 DCXRQ7Z4W1 244 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 PARP8Q8N3A8 854 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 TEX29Q8N6K0 151 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 OR2Z1Q8NG97 314 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 ERGIC1Q969X5 290 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 UTP4Q969X6 686 aaKnown RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 DUS3LQ96G46 650 aaKnown RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 OR2V2Q96R30 315 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 SIGLEC11Q96RL6 698 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 KCNJ15Q99712 375 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 WDR76Q9H967 626 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 NTN4Q9HB63 628 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 SLC25A19Q9HC21 320 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 GCM1Q9NP62 436 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 TMEM106BQ9NUM4 274 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 HIF1ANQ9NWT6 349 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 TREM2Q9NZC2 230 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PTTG3PQ9NZH4 202 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 PPP1R3CQ9UQK1 317 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 POLR3KQ9Y2Y1 108 aaPredicted RBP8.36□□□□□ -1.07
SKA2-208ENST00000583927 NPTNQ9Y639 398 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 CACNG2Q9Y698 323 aa8.36□□□□□ -1.07
SKA2-208ENST00000583927 TVP23AA6NH52 213 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 MLNRO43193 412 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 E2F6O75461 281 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 PTBP3O95758 552 aaKnown RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 APOC1P02654 83 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 LCATP04180 440 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 GYPBP06028 91 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 CLUP10909 449 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 PSKH1P11801 424 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 RPS27P42677 84 aaKnown RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 SLC15A1P46059 708 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SRP9P49458 86 aaKnown RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 ERFP50548 548 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 GRB2P62993 217 aaKnown RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 MVKQ03426 396 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 DBPQ10586 325 aaPredicted RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 GINS1Q14691 196 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SPRNQ5BIV9 151 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SLC35D3Q5M8T2 416 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 FAHD1Q6P587 224 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 PGAP1Q75T13 922 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 CXXC5Q7LFL8 322 aaKnown RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 NAA40Q86UY6 237 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 LRRC28Q86X40 367 aaPredicted RBP8.35□□□□□ -1.07
SKA2-208ENST00000583927 KLBQ86Z14 1044 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 TIGD4Q8IY51 512 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 PLPP7Q8NBV4 271 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 OR51L1Q8NGJ5 315 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 OR9Q1Q8NGQ5 310 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 OR6K6Q8NGW6 343 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SPATA3Q8NHX4 192 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 RNF133Q8WVZ7 376 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 ITLN1Q8WWA0 313 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SPSB4Q96A44 273 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SLAMF6Q96DU3 332 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 INTS14Q96SY0 518 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 MDFIQ99750 246 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 SP140LQ9H930 580 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 G6PC2Q9NQR9 355 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 TMEM100Q9NV29 134 aa8.35□□□□□ -1.07
SKA2-208ENST00000583927 PRR23D1E9PI22 279 aaPredicted RBP8.34□□□□□ -1.07
SKA2-208ENST00000583927 TMEM178BH3BS89 294 aa8.34□□□□□ -1.07
SKA2-208ENST00000583927 J3QLI3 93 aa8.34□□□□□ -1.07
SKA2-208ENST00000583927 XRCC2O43543 280 aa8.34□□□□□ -1.07
SKA2-208ENST00000583927 GMDSO60547 372 aa8.34□□□□□ -1.07
SKA2-208ENST00000583927 PNPP00491 289 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms