RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ZNF319Q9P2F9 582 aa8.24□□□□□ -1.09
RFFL-210ENST00000582308 R4GMQ9 66 aa8.24□□□□□ -1.09
RFFL-210ENST00000582308 ARFGEF3Q5TH69 2177 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ACOD1A6NK06 481 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 LOC110117498-PIK3R3F6TDL0 507 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ABCD4O14678 606 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 CASKO14936 926 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 OGG1O15527 345 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ICMTO60725 284 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 INMTO95050 263 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 CRYAAP02489 173 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 APOC1P02654 83 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 LCATP04180 440 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ANXA2P07355 339 aaKnown RBP8.23□□□□□ -1.09
RFFL-210ENST00000582308 ATP6V1B1P15313 513 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 PCSK6P29122 969 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 KIR3DL2P43630 455 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 SLC6A9P48067 706 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 TGM4P49221 684 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 UCP2P55851 309 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ACSM1Q08AH1 577 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ALKBH1Q13686 389 aaKnown RBP8.23□□□□□ -1.09
RFFL-210ENST00000582308 DAZAP2Q15038 168 aaPredicted RBP8.23□□□□□ -1.09
RFFL-210ENST00000582308 MED22Q15528 200 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ZNF829Q3KNS6 432 aaPredicted RBP8.23□□□□□ -1.09
RFFL-210ENST00000582308 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 BEX5Q5H9J7 111 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 UBE2UQ5VVX9 321 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 KCTD8Q6ZWB6 473 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 RFPL4BQ6ZWI9 263 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 CATSPERDQ86XM0 798 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ZNF101Q8IZC7 436 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ZFP41Q8N8Y5 198 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 SPOCK3Q9BQ16 436 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 OR51B6Q9H340 312 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 POFUT1Q9H488 388 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ESRP2Q9H6T0 727 aaKnown RBP8.23□□□□□ -1.09
RFFL-210ENST00000582308 G6PC2Q9NQR9 355 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 TBCCD1Q9NVR7 557 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 FRRS1LQ9P0K9 344 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 ST6GALNAC2Q9UJ37 374 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 OR52A1Q9UKL2 312 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 SLC22A13Q9Y226 551 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 STARD10Q9Y365 291 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 AKAP6Q13023 2319 aa8.23□□□□□ -1.09
RFFL-210ENST00000582308 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 CENPEQ02224 2701 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 OR4C45A6NMZ5 311 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 SHISA9B4DS77 424 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 ATP6V1G2-DDX39BF2Z307 99 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 SMPD2O60906 423 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 PLAUP00749 431 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 TTRP02766 147 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 FAM157BP0CG42 384 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 JUNBP17275 347 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 NR4A1P22736 598 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 RGS6P49758 472 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 NKX6-1P78426 367 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 MRPL28Q13084 256 aaKnown RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 NEDD8Q15843 81 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 CCDC58Q4VC31 144 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 WDR38Q5JTN6 314 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 SP5Q6BEB4 398 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 DMKNQ6E0U4 476 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 RPL22L1Q6P5R6 122 aaKnown RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 ZNF367Q7RTV3 350 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 ELMOD2Q8IZ81 293 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 PIAS4Q8N2W9 510 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 OR8B12Q8NGG6 310 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 FCGR1BQ92637 280 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 MUL1Q969V5 352 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 APOBEC3DQ96AK3 386 aaPredicted RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 PGAM5Q96HS1 289 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 COG8Q96MW5 612 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 OPALINQ96PE5 141 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 HS3ST6Q96QI5 342 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 MGLLQ99685 303 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 KCNS3Q9BQ31 491 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 PBOV1Q9GZY1 135 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 ISYNA1Q9NPH2 558 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 TRIM36Q9NQ86 728 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 EIF3KQ9UBQ5 218 aaKnown RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 NUFIP1Q9UHK0 495 aaKnown RBP8.22□□□□□ -1.09
RFFL-210ENST00000582308 GTF2A1LQ9UNN4 478 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 DSCAMO60469 2012 aa8.22□□□□□ -1.09
RFFL-210ENST00000582308 RAI1Q7Z5J4 1906 aaPredicted RBP8.21□□□□□ -1.09
RFFL-210ENST00000582308 CHD3Q12873 2000 aaKnown RBP8.21□□□□□ -1.1
RFFL-210ENST00000582308 TRBV2A0A0J9YWF9 115 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 A0A1B0GTI1 187 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 PNMA8CA0A1B0GUJ8 204 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 TBX1O43435 398 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 GPRIN2O60269 458 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 CD3EP07766 207 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 HSMCR30P0CW71 290 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 CELP19835 753 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 RAD52P43351 418 aa8.21□□□□□ -1.1
RFFL-210ENST00000582308 CCR9P51686 369 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms