RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 HIST1H3AP68431 136 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 SLC36A3Q495N2 470 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 SPRNQ5BIV9 151 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 HIST2H3PS2Q5TEC6 136 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 DNM1P34Q6PK57 102 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 IZUMO2Q6UXV1 221 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 Q6ZR03 302 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 HIST2H3AQ71DI3 136 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 C1QL2Q7Z5L3 287 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 ZNF283Q8N7M2 679 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 OR8D4Q8NGM9 314 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 CMBLQ96DG6 245 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 OR52D1Q9H346 318 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 TOR3AQ9H497 397 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 OCEL1Q9H607 264 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 IL20RAQ9UHF4 553 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 NPTNQ9Y639 398 aa17.68■□□□□ 0.42
CCDC42-203ENST00000581598 PPIAL4EA0A075B759 164 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 PPIAL4CA0A0B4J2A2 164 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 PPIAL4DF5H284 164 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 VENTXO95231 258 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 SOX14O95416 240 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 IGHV2-70P01814 119 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 PPIAL4FP0DN26 164 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 RAC2P15153 192 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 CRISP1P54107 249 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 USP43Q70EL4 1123 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 ZNF418Q8TF45 676 aaPredicted RBP17.67■□□□□ 0.42
CCDC42-203ENST00000581598 PLA2G12AQ9BZM1 189 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 RERGLQ9H628 205 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 EGLN3Q9H6Z9 239 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 TMEM106BQ9NUM4 274 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 IL19Q9UHD0 177 aa17.67■□□□□ 0.42
CCDC42-203ENST00000581598 IGLV1-36A0A0B4J1U3 117 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 RER1O15258 196 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 SURF4O15260 269 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 EPHA1P21709 976 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 EPHA2P29317 976 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 SLC6A6P31641 620 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 POLR2IP36954 125 aaKnown RBP17.66■□□□□ 0.42
CCDC42-203ENST00000581598 ZIK1Q3SY52 487 aaPredicted RBP17.66■□□□□ 0.42
CCDC42-203ENST00000581598 DCAF12L2Q5VW00 463 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 FBXW12Q6X9E4 464 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 GJC3Q8NFK1 279 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 SLC7A6Q92536 515 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 COQ7Q99807 217 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 HDHD2Q9H0R4 259 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 SLC25A19Q9HC21 320 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 ARHGAP32A7KAX9 2087 aa17.66■□□□□ 0.42
CCDC42-203ENST00000581598 LOC105371242A0A075B767 164 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 ISPDA4D126 451 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 ZAR1LA6NP61 321 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 HSPA13P48723 471 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 TMEM155Q4W5P6 130 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 OR2Z1Q8NG97 314 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 OR5L1Q8NGL2 311 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 TEX47Q8TBZ9 253 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 ST7LQ8TDW4 575 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 APOBEC3DQ96AK3 386 aaPredicted RBP17.65■□□□□ 0.42
CCDC42-203ENST00000581598 ERMAPQ96PL5 475 aaPredicted RBP17.65■□□□□ 0.42
CCDC42-203ENST00000581598 PITX2Q99697 317 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 RIBC2Q9H4K1 309 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 TBC1D23Q9NUY8 699 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 B9D1Q9UPM9 204 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 POLR1DQ9Y2S0 133 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 POLR3KQ9Y2Y1 108 aaPredicted RBP17.65■□□□□ 0.42
CCDC42-203ENST00000581598 LHFPL6Q9Y693 200 aa17.65■□□□□ 0.42
CCDC42-203ENST00000581598 H3BN98 237 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 IFNL4K9M1U5 179 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 DCTN6O00399 190 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 SLC16A6O15403 523 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 IDH3BO43837 385 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 FOXH1O75593 365 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 PPP1R3DO95685 299 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 HILS1P60008 231 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 ADARB1P78563 741 aaKnown RBP17.64■□□□□ 0.41
CCDC42-203ENST00000581598 CDK5Q00535 292 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 OTPQ5XKR4 325 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 OR6V1Q8N148 313 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 SPICQ8N5J4 248 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.64■□□□□ 0.41
CCDC42-203ENST00000581598 OR52L1Q8NGH7 329 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 NANPQ8TBE9 248 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 HRASLS5Q96KN8 279 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 TSSK2Q96PF2 358 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 SIGLEC11Q96RL6 698 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 ZNF184Q99676 751 aaPredicted RBP17.64■□□□□ 0.41
CCDC42-203ENST00000581598 ADI1Q9BV57 179 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 TSSK6Q9BXA6 273 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 FAM118AQ9NWS6 357 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 DCAF16Q9NXF7 216 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 PCDHB10Q9UN67 800 aa17.64■□□□□ 0.41
CCDC42-203ENST00000581598 H0YAE9 185 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 BHLHE40O14503 412 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 RENP00797 406 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 FSHBP01225 129 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 DBHP09172 617 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 PTGES3Q15185 160 aaKnown RBP17.63■□□□□ 0.41
CCDC42-203ENST00000581598 KRTAP27-1Q3LI81 207 aa17.63■□□□□ 0.41
CCDC42-203ENST00000581598 SLX4IPQ5VYV7 408 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms