RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 KIR2DS4P43632 304 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 LSM6P62312 80 aaKnown RBP10.46□□□□□ -0.73
SS18-219ENST00000581570 C11orf91Q3C1V1 193 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 OR4S1Q8NGB4 309 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 GRHPRQ9UBQ7 328 aa10.46□□□□□ -0.73
SS18-219ENST00000581570 RPUSD1Q9UJJ7 312 aaKnown RBP10.46□□□□□ -0.73
SS18-219ENST00000581570 TEX13CA0A0J9YWL9 993 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 TMEM120BA0PK00 339 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 OOEPA6NGQ2 149 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 XKRYO14609 159 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 NPFFO15130 113 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 AHCYL1O43865 530 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 FCN3O75636 299 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 MPIG6BO95866 241 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 PAHP00439 452 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 CTLA4P16410 223 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 CRYBA2P53672 197 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 GUCA2AQ02747 115 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 OR8G1Q15617 311 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 NSUN5P1Q3KNT7 163 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 METAP1DQ6UB28 335 aaPredicted RBP10.45□□□□□ -0.74
SS18-219ENST00000581570 CCDC80Q76M96 950 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 DHDDSQ86SQ9 333 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 KLHDC1Q8N7A1 406 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 ST8SIA4Q92187 359 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 CGREF1Q99674 301 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 RERGLQ9H628 205 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 KAT8Q9H7Z6 458 aaKnown RBP10.45□□□□□ -0.74
SS18-219ENST00000581570 SIRT7Q9NRC8 400 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 BAG5Q9UL15 447 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 COA3Q9Y2R0 106 aaPredicted RBP10.45□□□□□ -0.74
SS18-219ENST00000581570 DNAH3Q8TD57 4116 aa10.45□□□□□ -0.74
SS18-219ENST00000581570 PRSS37A4D1T9 235 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 SLC16A7O60669 478 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 KHDRBS3O75525 346 aaKnown RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 RPL4P36578 427 aaKnown RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 OR1E2P47887 323 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 POU4F2Q12837 409 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 FHL1Q13642 323 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 VMACQ2NL98 169 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 ANKDD1AQ495B1 522 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 FOXB2Q5VYV0 432 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 COLCA1Q6ZS62 124 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 OAFQ86UD1 273 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 CALHM3Q86XJ0 350 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 GLB1L2Q8IW92 636 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 MREGQ8N565 214 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 OR10A6Q8NH74 314 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 SPRYD4Q8WW59 207 aaPredicted RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 Q96M85 177 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 COQ7Q99807 217 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 DNAJB11Q9UBS4 358 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 POLR1DQ9Y2S0 133 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 NOP16Q9Y3C1 178 aaKnown RBP10.44□□□□□ -0.74
SS18-219ENST00000581570 ADAM18Q9Y3Q7 739 aa10.44□□□□□ -0.74
SS18-219ENST00000581570 EFCAB9A8MZ26 197 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 CD14P08571 375 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 VSIG10L2P0DP72 767 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 CA6P23280 308 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 IDH3AP50213 366 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 ST3GAL3Q11203 375 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 MESTQ5EB52 335 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 FAM90A1Q86YD7 464 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 CMTM4Q8IZR5 234 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 FGFRL1Q8N441 504 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 GJC3Q8NFK1 279 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 OR2T6Q8NHC8 308 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 SLCO4A1Q96BD0 722 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 R3HDM4Q96D70 268 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 ZNF570Q96NI8 536 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 EBF4Q9BQW3 602 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 CCDC28BQ9BUN5 200 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 SLC22A4Q9H015 551 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 HDHD2Q9H0R4 259 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 MMP28Q9H239 520 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 C1orf123Q9NWV4 160 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 KAAG1Q9UBP8 84 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 RPS6KA6Q9UK32 745 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 NDUFAF1Q9Y375 327 aa10.43□□□□□ -0.74
SS18-219ENST00000581570 IGHV3OR15-7A0A075B7D8 119 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 MEIOCA2RUB1 952 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 H3BUX3 64 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 GMDSO60547 372 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 PTBP3O95758 552 aaKnown RBP10.42□□□□□ -0.74
SS18-219ENST00000581570 IFNA8P32881 189 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 SAA4P35542 130 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 SLC9A3P48764 834 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 DLX1P56177 255 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 HIST1H3AP68431 136 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms