RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 RBM4Q9BWF3 364 aaKnown RBP8.21□□□□□ -1.1
TOP3A-211ENST00000581536 HCAR1Q9BXC0 346 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 DGCR6LQ9BY27 220 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 CADM1Q9BY67 442 aaKnown RBP8.21□□□□□ -1.1
TOP3A-211ENST00000581536 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 TMEFF2Q9UIK5 374 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-211ENST00000581536 CDC42EP3Q9UKI2 254 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 POMPQ9Y244 141 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 WIPI2Q9Y4P8 454 aa8.21□□□□□ -1.1
TOP3A-211ENST00000581536 IGHV3-64DA0A0J9YX35 117 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 DHRS12A0PJE2 317 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 FAM183AA6NL82 134 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 AQP12BA6NM10 295 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 ZNF593O00488 134 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-211ENST00000581536 GNGT2O14610 69 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 DNAJC8O75937 253 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-211ENST00000581536 MT-ND5P03915 603 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 ACSM4P0C7M7 580 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 FAM157CP0CG43 387 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 ZNF823P16415 610 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 LIPAP38571 399 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 TNFAIP6P98066 277 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-211ENST00000581536 HFEQ30201 348 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 SLC36A3Q495N2 470 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 RPL13AP3Q6NVV1 102 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 AQP12AQ8IXF9 295 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 C1orf174Q8IYL3 243 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 PROKR2Q8NFJ6 384 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 OR2AJ1Q8NGZ0 328 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 ITLN1Q8WWA0 313 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 COQ7Q99807 217 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 C1QTNF5Q9BXJ0 243 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 NMNAT2Q9BZQ4 307 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 CYSLTR2Q9NS75 346 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 PDP1Q9P0J1 537 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-211ENST00000581536 ZDHHC8Q9ULC8 765 aa8.2□□□□□ -1.1
TOP3A-211ENST00000581536 TCRBV3S1A0A5B6 114 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 H3BSA7 217 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 MLNRO43193 412 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 LCATP04180 440 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 HLA-DPB1P04440 258 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ADH4P08319 380 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 SBK2P0C263 348 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 RAC2P15153 192 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 SELEP16581 610 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 SPI1P17947 270 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 GSTM3P21266 225 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 POU1F1P28069 291 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 CBX1P83916 185 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 BNIP1Q12981 228 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 GINS1Q14691 196 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 SNAI3Q3KNW1 292 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 FAM209AQ5JX71 171 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 LINC01590Q5TEZ4 76 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 TMEM236Q5W0B7 351 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 CD300LDQ6UXZ3 194 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 FBXW12Q6X9E4 464 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 COLCA1Q6ZS62 124 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 SPATC1Q76KD6 591 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ATG16L2Q8NAA4 619 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 BHLHE23Q8NDY6 225 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 OR2T33Q8NG76 320 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 OR5L1Q8NGL2 311 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 OR2T4Q8NH00 348 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ZNF420Q8TAQ5 688 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-211ENST00000581536 APOBEC3DQ96AK3 386 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-211ENST00000581536 OTULINQ96BN8 352 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ELMOD3Q96FG2 381 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ATF6BQ99941 703 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ZNF665Q9H7R5 613 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 NTN4Q9HB63 628 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 CENPMQ9NSP4 180 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 HIF1ANQ9NWT6 349 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 N6AMT1Q9Y5N5 214 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 COL6A5A8TX70 2615 aa8.19□□□□□ -1.1
TOP3A-211ENST00000581536 ATRQ13535 2644 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 B4DSR2 109 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 CLDN25C9JDP6 229 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 H3BN98 237 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 PLPP2O43688 288 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 FKBP6O75344 327 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 TIPRLO75663 272 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 ZNF205O95201 554 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 CD55P08174 381 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 SPARCP09486 303 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 SRD5A1P18405 259 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 TUBG1P23258 451 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 FMO3P31513 532 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 PMELP40967 661 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 ENTPD1P49961 510 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 PRKXP51817 358 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 SLC25A1P53007 311 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 DVL1P1P54792 670 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-211ENST00000581536 HOXA4Q00056 320 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-211ENST00000581536 FLOT2Q14254 428 aa8.18□□□□□ -1.1
TOP3A-211ENST00000581536 GK2Q14410 553 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms