RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 LCATP04180 440 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 CD55P08174 381 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 SLC2A1P11166 492 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 ZNF16P17020 682 aaPredicted RBP17.07■□□□□ 0.32
SS18-218ENST00000581021 IGFBP5P24593 272 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 NAA10P41227 235 aaPredicted RBP17.07■□□□□ 0.32
SS18-218ENST00000581021 EFNB1P98172 346 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 EIF2B1Q14232 305 aaKnown RBP17.07■□□□□ 0.32
SS18-218ENST00000581021 GK2Q14410 553 aaPredicted RBP17.07■□□□□ 0.32
SS18-218ENST00000581021 FAM209AQ5JX71 171 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 C6orf52Q5T4I8 152 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 C12orf73Q69YU5 71 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 COG8Q96MW5 612 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 SAP30LQ9HAJ7 183 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 CYSLTR2Q9NS75 346 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 CENPMQ9NSP4 180 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 DCAF16Q9NXF7 216 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 TREM2Q9NZC2 230 aa17.07■□□□□ 0.32
SS18-218ENST00000581021 CGGBP1Q9UFW8 167 aaPredicted RBP17.07■□□□□ 0.32
SS18-218ENST00000581021 IGHV1-69-2A0A0G2JMI3 117 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 CRYBB2P43320 205 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 PRKXP51817 358 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 TPTEP56180 551 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 APOFQ13790 326 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 ZNF540Q8NDQ6 660 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 OR2AE1Q8NHA4 323 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 RNF133Q8WVZ7 376 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 SPTSSAQ969W0 71 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 PLEKHA8Q96JA3 519 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 OSBPL10Q9BXB5 764 aa17.06■□□□□ 0.32
SS18-218ENST00000581021 ZNF878C9JN71 531 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 LIPAP38571 399 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 OPRL1P41146 370 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 GPR6P46095 362 aaPredicted RBP17.05■□□□□ 0.32
SS18-218ENST00000581021 SLC6A9P48067 706 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 GLYATL3Q5SZD4 288 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 PRSS45Q7RTY3 260 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 BHLHE23Q8NDY6 225 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 OR2Z1Q8NG97 314 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 OR5L1Q8NGL2 311 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 MSI2Q96DH6 328 aaKnown RBP17.05■□□□□ 0.32
SS18-218ENST00000581021 ELMOD3Q96FG2 381 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 KCNJ15Q99712 375 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 GABARAPL3Q9BY60 117 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 NARFLQ9H6Q4 476 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 YAE1D1Q9NRH1 226 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 DECR2Q9NUI1 292 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 ZDHHC8Q9ULC8 765 aa17.05■□□□□ 0.32
SS18-218ENST00000581021 MALRD1Q5VYJ5 2156 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 IQCF6A8MYZ5 107 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 PRR32B1ATL7 298 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 H0YL77 283 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 MLNRO43193 412 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 TPD52L2O43399 206 aaKnown RBP17.04■□□□□ 0.32
SS18-218ENST00000581021 PPIHO43447 177 aaKnown RBP17.04■□□□□ 0.32
SS18-218ENST00000581021 HCCSP53701 268 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 TNFAIP6P98066 277 aaPredicted RBP17.04■□□□□ 0.32
SS18-218ENST00000581021 ZNF92Q03936 586 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 ZMAT1Q5H9K5 638 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 SLC35D3Q5M8T2 416 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 AVPI1Q5T686 147 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 ZFP1Q6P2D0 407 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 DRAM2Q6UX65 266 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 TCEANCQ8N8B7 351 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 OR8G5Q8NG78 346 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 OR10AD1Q8NGE0 317 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 OTOSQ8NHW6 89 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.04■□□□□ 0.328e-11■■■■■ 40.5
SS18-218ENST00000581021 TANC2Q9HCD6 1990 aa17.04■□□□□ 0.32
SS18-218ENST00000581021 JMJD1CQ15652 2540 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 A0A1B0GWJ7 208 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 EI24O14681 340 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
SS18-218ENST00000581021 ALPLP05186 524 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 MRPL3P09001 348 aaKnown RBP17.03■□□□□ 0.32
SS18-218ENST00000581021 CHN2P52757 468 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 TMEM33P57088 247 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 RPS7P62081 194 aaKnown RBP17.03■□□□□ 0.32
SS18-218ENST00000581021 AADACL4Q5VUY2 407 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 RFLNBQ8N5W9 214 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 CLDND2Q8NHS1 167 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 IL4I1Q96RQ9 567 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 TEAD3Q99594 435 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 SLC30A2Q9BRI3 323 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 TEX12Q9BXU0 123 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 RIBC2Q9H4K1 309 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 ZNF319Q9P2F9 582 aa17.03■□□□□ 0.32
SS18-218ENST00000581021 CX3CR1P49238 355 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 TAF13Q15543 124 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 CYB5R2Q6BCY4 276 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 SHFQ7M4L6 423 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 TMEM163Q8TC26 289 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 ITLN1Q8WWA0 313 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 DIRC2Q96SL1 478 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 RBM4BQ9BQ04 359 aaKnown RBP17.02■□□□□ 0.32
SS18-218ENST00000581021 S100A14Q9HCY8 104 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 DNAJC27Q9NZQ0 273 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 N6AMT1Q9Y5N5 214 aa17.02■□□□□ 0.32
SS18-218ENST00000581021 HLA-DPB1P04440 258 aa17.01■□□□□ 0.31
SS18-218ENST00000581021 LYNP07948 512 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms