RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 AASSQ9UDR5 926 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 ADAM18Q9Y3Q7 739 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 MMP24Q9Y5R2 645 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 AUP1Q9Y679 476 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 TEX13CA0A0J9YWL9 993 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 C17orf100A8MU93 164 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 CLDN34H7C241 214 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 WBP4O75554 376 aaKnown RBP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 FOXH1O75593 365 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 SLC2A10O95528 541 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 TXNDC12O95881 172 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 IGHMP01871 453 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 RPSAP08865 295 aaKnown RBP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 VSIG8P0DPA2 414 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF35P13682 527 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 HIST1H1CP16403 213 aaKnown RBP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF43P17038 809 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 SDHAP31040 664 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 FMO3P31513 532 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 MTNR1AP48039 350 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 P2RY4P51582 365 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 RPL27P61353 136 aaKnown RBP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 C1DQ13901 141 aaKnown RBP9.09□□□□□ -0.95
TOP3A-210ENST00000580713 HFEQ30201 348 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 PCGF3Q3KNV8 242 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 MEDAGQ5VYS4 303 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 FAM122BQ7Z309 247 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 PXKQ7Z7A4 578 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 JAZF1Q86VZ6 243 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 UEVLDQ8IX04 471 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 OR4F5Q8NH21 305 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 OR4K13Q8NH42 304 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 APH1BQ8WW43 257 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 RASD2Q96D21 266 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 Q96M85 177 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 OXGR1Q96P68 337 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 TXNIPQ9H3M7 391 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 FN3KQ9H479 309 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 DNAJC27Q9NZQ0 273 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 MYRFQ9Y2G1 1151 aa9.09□□□□□ -0.95
TOP3A-210ENST00000580713 LOC102725191A0A1B0GVB3 256 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 NPIPB13A6NJU9 1138 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF99A8MXY4 864 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 NPIPB4C9JG80 1138 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 PRR23D1E9PI22 279 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 M0R3G1 203 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SLC1A7O00341 560 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 XKRYO14609 159 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 FAM20BO75063 409 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ENTPD6O75354 484 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 TNFAIP8O95379 198 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RAB36O95755 333 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 CLPTM1O96005 669 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RPLP1P05386 114 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 PRR23D2P0DMB1 279 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 HLA-DOBP13765 273 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF14P17017 642 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 PAICSP22234 425 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 DAP3P51398 398 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RAG2P55895 527 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 CXCR4P61073 352 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 EFNB1P98172 346 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 KRR1Q13601 381 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SMN1Q16637 294 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 TSTQ16762 297 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 KLF17Q5JT82 389 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RBM48Q5RL73 367 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SLC25A30Q5SVS4 291 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF362Q5T0B9 420 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 OLFML2AQ68BL7 652 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 LAIR2Q6ISS4 152 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RGS7BPQ6MZT1 257 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SLC35D2Q76EJ3 337 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 CPOQ8IVL8 374 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SLC37A3Q8NCC5 494 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 DEFB108BQ8NET1 73 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SDR9C7Q8NEX9 313 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 BPIFB6Q8NFQ5 453 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 OR52E2Q8NGJ4 325 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 FAM110DQ8TAY7 271 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF519Q8TB69 540 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 CCL17Q92583 94 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF566Q969W8 418 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 OTULINQ96BN8 352 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 LRR1Q96L50 414 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 CITED1Q99966 193 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 MRI1Q9BV20 369 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 YTHDF1Q9BYJ9 559 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 MMP26Q9NRE1 261 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 TNFRSF19Q9NS68 423 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 B3GNT2Q9NY97 397 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 H2AFY2Q9P0M6 372 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 B3GAT1Q9P2W7 334 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 PURGQ9UJV8 347 aaKnown RBP9.08□□□□□ -0.96
TOP3A-210ENST00000580713 BLOC1S6Q9UL45 172 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 RCE1Q9Y256 329 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms