RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PLEKHA8Q96JA3 519 aa17.04■□□□□ 0.32
SMG8-204ENST00000580498 FEVQ99581 238 aa17.04■□□□□ 0.32
SMG8-204ENST00000580498 OPA3Q9H6K4 179 aa17.04■□□□□ 0.32
SMG8-204ENST00000580498 MRPL22Q9NWU5 206 aaKnown RBP17.04■□□□□ 0.32
SMG8-204ENST00000580498 DYSFO75923 2080 aa17.04■□□□□ 0.32
SMG8-204ENST00000580498 ATRQ13535 2644 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 TVP23AA6NH52 213 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 ACOT8O14734 319 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 DNAJC8O75937 253 aaPredicted RBP17.03■□□□□ 0.32
SMG8-204ENST00000580498 GRK5P34947 590 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 BTG1P62324 171 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 MZT1Q08AG7 82 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 TMEM155Q4W5P6 130 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 COLCA1Q6ZS62 124 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 DCXRQ7Z4W1 244 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 ADGRG5Q8IZF4 528 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 BHLHE23Q8NDY6 225 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 OR51L1Q8NGJ5 315 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 CANT1Q8WVQ1 401 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 RBM4Q9BWF3 364 aaKnown RBP17.03■□□□□ 0.32
SMG8-204ENST00000580498 OCEL1Q9H607 264 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 CMC2Q9NRP2 79 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 CENPMQ9NSP4 180 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 PDP1Q9P0J1 537 aaPredicted RBP17.03■□□□□ 0.32
SMG8-204ENST00000580498 KIF17Q9P2E2 1029 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 COMMD3-BMI1R4GMX3 469 aa17.03■□□□□ 0.32
SMG8-204ENST00000580498 ZNF878C9JN71 531 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 ZNF593O00488 134 aaPredicted RBP17.02■□□□□ 0.32
SMG8-204ENST00000580498 PLPP2O43688 288 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 HMGN1P05114 100 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 ANXA8P13928 327 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 SPI1P17947 270 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 CPT2P23786 658 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 POU1F1P28069 291 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 HSD11B1P28845 292 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 MDH2P40926 338 aaKnown RBP17.02■□□□□ 0.32
SMG8-204ENST00000580498 GRB2P62993 217 aaKnown RBP17.02■□□□□ 0.32
SMG8-204ENST00000580498 Q6ZR03 302 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 SHFQ7M4L6 423 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 OR10AD1Q8NGE0 317 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 OR11L1Q8NGX0 322 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 SLC30A2Q9BRI3 323 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 TOR3AQ9H497 397 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 METTL17Q9H7H0 456 aaPredicted RBP17.02■□□□□ 0.32
SMG8-204ENST00000580498 DDX28Q9NUL7 540 aaKnown RBP17.02■□□□□ 0.32
SMG8-204ENST00000580498 VNN3Q9NY84 501 aa17.02■□□□□ 0.32
SMG8-204ENST00000580498 GGT3PA6NGU5 568 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 GK2Q14410 553 aaPredicted RBP17.01■□□□□ 0.31
SMG8-204ENST00000580498 KRTAP27-1Q3LI81 207 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 TEX30Q5JUR7 227 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 ZNF771Q7L3S4 317 aaPredicted RBP17.01■□□□□ 0.31
SMG8-204ENST00000580498 OR4Q3Q8NH05 313 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 ZNF418Q8TF45 676 aaPredicted RBP17.01■□□□□ 0.31
SMG8-204ENST00000580498 DNAJC9Q8WXX5 260 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 ERGIC1Q969X5 290 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 SLCO4A1Q96BD0 722 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 MAP6Q96JE9 813 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 MEGF10Q96KG7 1140 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 INTS14Q96SY0 518 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 KCNJ15Q99712 375 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 NIPSNAP1Q9BPW8 284 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 WDR76Q9H967 626 aa17.01■□□□□ 0.31
SMG8-204ENST00000580498 A0A0A6YYJ9 748 aa17■□□□□ 0.31
SMG8-204ENST00000580498 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17■□□□□ 0.31
SMG8-204ENST00000580498 PRR23D1E9PI22 279 aaPredicted RBP17■□□□□ 0.31
SMG8-204ENST00000580498 DEAF1O75398 565 aaPredicted RBP17■□□□□ 0.31
SMG8-204ENST00000580498 ATP5HO75947 161 aa17■□□□□ 0.31
SMG8-204ENST00000580498 IGHV2-70P01814 119 aa17■□□□□ 0.31
SMG8-204ENST00000580498 GYPBP06028 91 aa17■□□□□ 0.31
SMG8-204ENST00000580498 PRR23D2P0DMB1 279 aaPredicted RBP17■□□□□ 0.31
SMG8-204ENST00000580498 CBX1P83916 185 aa17■□□□□ 0.31
SMG8-204ENST00000580498 OR8G1Q15617 311 aa17■□□□□ 0.31
SMG8-204ENST00000580498 ESCO2Q56NI9 601 aa17■□□□□ 0.31
SMG8-204ENST00000580498 CELF2-AS1Q8N7Q2 184 aa17■□□□□ 0.31
SMG8-204ENST00000580498 OR6N2Q8NGY6 317 aa17■□□□□ 0.31
SMG8-204ENST00000580498 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
SMG8-204ENST00000580498 DDOQ99489 341 aa17■□□□□ 0.31
SMG8-204ENST00000580498 PRRG3Q9BZD7 231 aa17■□□□□ 0.31
SMG8-204ENST00000580498 GCM1Q9NP62 436 aa17■□□□□ 0.31
SMG8-204ENST00000580498 PNRC2Q9NPJ4 139 aaKnown RBP17■□□□□ 0.31
SMG8-204ENST00000580498 DNAJB9Q9UBS3 223 aa17■□□□□ 0.31
SMG8-204ENST00000580498 TMEM178BH3BS89 294 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 XRCC2O43543 280 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 CFL1P23528 166 aaKnown RBP16.99■□□□□ 0.31
SMG8-204ENST00000580498 GSTT1P30711 240 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 ERFP50548 548 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 MMP16P51512 607 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 EIF2B1Q14232 305 aaKnown RBP16.99■□□□□ 0.31
SMG8-204ENST00000580498 SNCBQ16143 134 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 NLRC3Q7RTR2 1065 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 LRRC28Q86X40 367 aaPredicted RBP16.99■□□□□ 0.31
SMG8-204ENST00000580498 ERI1Q8IV48 349 aaKnown RBP16.99■□□□□ 0.31
SMG8-204ENST00000580498 SPERTQ8NA61 448 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 ZNF511Q8NB15 262 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 NANPQ8TBE9 248 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 JMJD8Q96S16 334 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 NMNAT2Q9BZQ4 307 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 PATZ1Q9HBE1 687 aaKnown RBP16.99■□□□□ 0.31
SMG8-204ENST00000580498 N6AMT1Q9Y5N5 214 aa16.99■□□□□ 0.31
SMG8-204ENST00000580498 PPIAL4EA0A075B759 164 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms