RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 FAM20BO75063 409 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 SULT1C4O75897 302 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 TACSTD2P09758 323 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 DCKP27707 260 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 ZNF121P58317 390 aaPredicted RBP13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 SNRPD2P62316 118 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 MSMPQ1L6U9 139 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 CDH24Q86UP0 819 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 LRP11Q86VZ4 500 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 RFLNBQ8N5W9 214 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 YIPF7Q8N8F6 280 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 OR52H1Q8NGJ2 320 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 GGHQ92820 318 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 HAVCR1Q96D42 359 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 BRD7Q9NPI1 651 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 MYRFQ9Y2G1 1151 aa13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 HEATR1Q9H583 2144 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-205ENST00000579221 HECTD1Q9ULT8 2610 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 TMEM269A0A1B0GVZ9 245 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 A0A1W2PPW3 197 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 PRR32B1ATL7 298 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 OVOL3O00110 214 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 TBX1O43435 398 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 CLPTM1O96005 669 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 IGHV3-13P01766 116 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 SLC2A1P11166 492 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 RAC2P15153 192 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 MPV17P39210 176 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 MED21Q13503 144 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 GALEQ14376 348 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 ZNF829Q3KNS6 432 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 LAIR2Q6ISS4 152 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 EGFL6Q8IUX8 553 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 IGFBPL1Q8WX77 278 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 TRMT61AQ96FX7 289 aaKnown RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 TMEM80Q96HE8 168 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 CNBD2Q96M20 576 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 OR10A2Q9H208 303 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 POFUT1Q9H488 388 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 CNOT2Q9NZN8 540 aaKnown RBP13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 TAAR3PQ9P1P4 343 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 PSORS1C1Q9UIG5 152 aa13.35□□□□□ -0.27
SLC6A4-205ENST00000579221 XRCC2O43543 280 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 IGHA1P01876 353 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 MT-ND5P03915 603 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 PIPP12273 146 aaPredicted RBP13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 SELEP16581 610 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 LIPAP38571 399 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 MMP16P51512 607 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 ACTA2P62736 377 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 ACTG2P63267 376 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 PSG7Q13046 419 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 SNAI3Q3KNW1 292 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 CDONQ4KMG0 1287 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 PRSS45Q7RTY3 260 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 MRPL21Q7Z2W9 205 aaKnown RBP13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 ZNF540Q8NDQ6 660 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 JAM3Q9BX67 310 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 CACNG6Q9BXT2 260 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 MS4A5Q9H3V2 200 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 DYNLRB1Q9NP97 96 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 ERVK13-1Q9NX77 482 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 GNG8Q9UK08 70 aa13.34□□□□□ -0.27
SLC6A4-205ENST00000579221 J3QLW9 94 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 TIMM8AO60220 97 aaPredicted RBP13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 ZNF19P17023 458 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 MYL12AP19105 171 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 KITLGP21583 273 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 CFL1P23528 166 aaKnown RBP13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 ST3GAL4Q11206 333 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 GK2Q14410 553 aaPredicted RBP13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 HLXQ14774 488 aaPredicted RBP13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 TIGD6Q17RP2 521 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 NKPD1Q17RQ9 610 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 TP53I3Q53FA7 332 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
SLC6A4-205ENST00000579221 LIPNQ5VXI9 398 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms